Prunus avium (sweet cherry): 110770461
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Entry
110770461 CDS
T05161
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pavi01009
]
110770461
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110770461
Enzymes [BR:
pavi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110770461
Protein phosphatases and associated proteins [BR:
pavi01009
]
HAD phosphatases
Fcp/Scp phosphatases
110770461
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110770461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NIF
dsrm
DUF3708
Motif
Other DBs
NCBI-GeneID:
110770461
NCBI-ProteinID:
XP_021830292
UniProt:
A0A6P5TT55
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MSRLGFKSVVFHGDLCLGELDAIPVKDQKFQFPNNEIRIHRISQQSERCPPLSILQTISS
FSVRCKLESTSPVEQPHLINLHACCFYEFKTAVVVVGGEEIHLVAMPSKQKKFPCFWCYA
VPVGLYSASLRMLNLRCLSIVFDLDETLIVANTMKSFDDRIEALRSWIARESEMVRIAGM
SAEMKRYMDDRWLLKQYIDNDCVVDNGKVYKVQQEDFPPLSDNHEKIVRPIIRLPEKNIV
LTRINPEIRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPES
HLIGSKQLLDRVVCVKTGSRKSLLNVFQHGVCHPKMAMVIDDRSKVWEDKDQPRVHVVPA
FTPYYAPQAETASPVPVLCVARNVACNVRGCFFKEFDEILLRRISEVFYEDEVVNLPPAP
DVSNYLMSEDAGLATNGNLNAPVSEGMNGGEVARRINQSDDKFGADSVAHSLKNQAEVRS
DNSQAPVAILPNVVGAASSRPVMPSQKPGLLGPPVRRDSFSDRDYEMKRGLLGTNPGLDM
RNQTSAELPHLSRVPAQMPATSIHAQGGWLVDDDNNRGPPSNRPSGFVQPPDIIKSEKLV
HQNPFSPATPGSTPSGLLSQKSDVKREEVFSGQDLQKQNLPPPSQLSEAGASQNQASSFN
RESQLESAKVNLLPSPLSIGVLQEIGRRCSSKVGLAXELSCINTGLXHAHCXPLFLKVLF
TGEKIGFGMGRTRKDAQQQAAENALHSLADKYVAYLAPRSGAVDRDIDKVSVGNENGFVL
DIVGPELTELLREDGMPKESTSEATEVEPESTSITVSQQVQKRASLPRLLQSLPNKRLKG
EILHGSQSLSSSRPQKNVPSDKP
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtttagggtttaagtccgtggtcttccacggcgacctgtgtttgggagaactg
gatgctattccggtgaaggaccagaagttccagttcccaaacaatgagattcgaatccac
cgcatatcgcaacaaagtgaacgatgccctcctctctcaattctccaaacgatttcgtca
ttttcggttcgatgcaagctcgaatcgacctcccctgttgaacagccccatttgatcaat
cttcacgcctgctgcttctacgagttcaagactgcggttgtagtggttggtggtgaagag
attcacttggtggcaatgccgagtaaacagaagaagtttccctgcttttggtgctatgcg
gttcctgtaggtctgtacagtgcttcactacgaatgctgaatctaaggtgtctctcaatt
gtgtttgatctcgacgagacgctgattgttgccaacaccatgaagtcttttgatgataga
attgaggctttacgaagctggattgcacgcgagagtgaaatggtgagaatagccggaatg
tctgctgaaatgaagcggtacatggacgatcggtggctgttgaagcagtacatagataat
gactgtgtggtggataatggaaaggtgtacaaggttcaacaggaagattttcctccgctg
tctgataaccacgagaaaattgttcggcctatcattagattgccagagaagaacattgtg
ctcactcgcatcaatcctgagattcgtgataccagcgtgcttgtgaggttacgacctgca
tgggaagatttgagaagttatttaactgcaaaaggacgcaagcggtttgaagtttatgtc
tgtaccatggctgaaagggattatgccttagaaatgtggaggcttcttgatccagagtca
cacctaataggttcaaagcaacttctggaccgtgttgtttgtgtcaaaacaggctccagg
aaatctttactcaatgtctttcaacatggagtgtgccatccaaagatggcaatggtaatt
gatgaccgttcaaaggtttgggaagataaggatcaacctcgagttcatgtagttccagca
ttcactccttattatgctcctcaagcagagactgcaagtcccgttcccgtcctctgtgtt
gcaagaaatgttgcatgcaatgtcagaggttgttttttcaaagagtttgatgagatttta
ctgcgaagaatttctgaagttttttatgaagatgaggtggtaaatttacctcctgctcct
gatgtgagcaattacttgatgtctgaggatgctggtttggcaaccaatggaaatcttaat
gctcctgttagtgaaggaatgaatggcggtgaagttgcaaggagaataaaccaatctgat
gacaagtttggtgcagactcagtggctcattctctgaaaaatcaggctgaggtaagatcg
gacaactctcaggcacctgttgcaattcttcccaatgtcgttggtgcagcatcttcgagg
ccggtcatgccttctcagaaacctggtttgcttggacctcctgttagaagagacagcttt
tctgatcgtgactatgaaatgaagagaggactccttggtacaaatcctggtctagatatg
agaaatcaaacctctgctgaactcccgcatctatccagggtacctgcacaaatgccagca
acctcaatacatgcacaagggggatggttggtggatgacgacaacaataggggacctccg
agtaatcgaccttctgggtttgttcaaccgcctgacatcataaaatctgaaaagctagtt
caccagaatccttttagtcctgctacaccaggttctactcccagtggtttgctctcacaa
aaatctgatgtgaaaagggaagaggtattctctgggcaagatttacaaaaacaaaatctt
cctcctccaagtcagctatcagaggccggtgcatcccagaatcaggcatcttcttttaat
agagaatctcaattagaatctgcaaaagtgaacctcctgccatcccctttatctattgga
gtgctgcaggaaattggacgaagatgcagctcaaaggtaggattagcttgagaactatct
tgtatcaatactggactctaacatgctcattgttaacctttgtttctgaaggttctcttc
actggagagaagattggttttggaatgggtaggacgaggaaggacgctcaacaacaggct
gctgagaatgctcttcacagcttggctgataaatatgtagcgtatctcgcacctcgttct
ggagctgtggacagagatattgataaagtctcagtcgggaatgaaaatggatttgtattg
gacatcgtcggtcctgaattgactgagctgctaagggaagatggaatgcctaaagaaagc
acttctgaggctactgaagttgaacctgaaagtacttctattacagtgagtcagcaagtt
caaaagcgtgcaagtttgccaagattgctacagtctcttccaaataaacgattaaaggga
gaaatattgcatggctcacaaagtttatcatcttcacggccgcagaagaatgtaccttca
gacaaaccttga
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