Prunus avium (sweet cherry): 110770574
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Entry
110770574 CDS
T05161
Name
(RefSeq) phytochrome A
KO
K12120
phytochrome A
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110770574
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
110770574
NCBI-ProteinID:
XP_021830424
UniProt:
A0A6P5TU94
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MSSSRPSDSSTNSGRSRHSARIIAQTTVDAKLHADFEESGSSFDYSNSVRVSGSVGGDQQ
PRSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGDY
PVLGVGTDIRTIFTAPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAITHRVTGSLII
DFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVM
AYKFHDDDHGEVVSEITKPGLEPYLGLHYPSTDIPQASRFLFMKNKVRMIVDCCAKQVKV
LQDEKLPFDLTLCGSTLRAPHSCHLQYMKNMESIASLVMAVVVNEGDDEVASPDSVQPQK
RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIELEDQMVEKNILRTQTLLC
DMLLRDAPLGIVSQSPNIMDLVKCDGAALLYKSKIWRLGITPSDFQLHDIASWLAEYHMD
STGLSTDSLYDAGFPGALALGDVVCGMAAVRITAKDMLFWFRSHAAAEIRWGGAKHESGE
KDDGWKMHPRSSFKAFLEVVKSRSLPWKDFEMDAIHSLQLILRNAFKDVETVDVNPNAIH
VKLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLPVDKAI
GKHLLTLVEDSSTKMVKRMLDLALHGKEEQNIQFEIKTHGSRSDLGPISLVVNACASRDI
RENVVGVCFVAQDITGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPA
MTKLTGWKREEVIDKMLLGEVFGINMACCPLKSQEAFVNLGIVLNHAMTGQVSEKVPFGF
CARSGKHIECLLCVSKKLDSEGSVTGVFCFLQLASPELQQALHVQRLSEQTAVKRSKELS
YIKRQIRNPLAGMMFSWKMMEGTELGTEQKQLLHTSAQCQHQLNKILDDSDLDTIIDGYL
ELEMVEFTLHEVLLASVSQVMIKSNAKSIRIVHDAAEEIMNETLYGDSLRLQQVLADFLA
VSIYFMPNGGQLTIAANLTKDQLGQSVHLVHLELRITHAGGGIPEGLLNQMFGNDIAISE
EGIGLLVSSRLVKLMNGDVRYLREAGKATFIISVELAAAHKLRS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcaagacccagcgactcatccaccaattcagggcggtctagacacagtgct
agaattattgctcagacaactgttgatgccaagctgcatgctgattttgaggagtcaggt
agttcctttgactactcgaactcggtgcgcgttagtggttcagttggaggggatcaacaa
cctaggtcagacaaagtgaccactgcttatctccatcacatacagaaaggcaagctgatc
cagccattcggatgcttgctagccttggatgagaaaactttcaaggtcattgcatacagt
gagaatgcccctgaaatgctgactatggtcagtcatgcagtcccaagcgttggggactac
cctgttcttggcgtaggaacagatataagaacaattttcactgcccctagtgcctctgca
ttgcataaggcccttggattcggagaggtttctctcttgaatcccatcttagtccattgc
aagacctctggcaagcctttttatgcaataacccatcgagtaacgggcagtttgatcatt
gacttcgagccggtgaagccttatgaagtccctatgactgctgctggggccctgcagtca
tacaagctggcagctaaagctattgcccgattgcagtctttgcctagtgggagcatggag
aggctttgtgatacaatggtccaagaggtttttgaactcaccggttatgacagggtgatg
gcctataaatttcatgatgatgatcatggggaagtggtctctgagattacgaagcctggc
ctggaaccatatctgggtttgcattatccatccactgacatacctcaggcttcacggttc
ctatttatgaagaataaggtccgaatgattgttgactgttgtgcaaaacaggtgaaggtg
cttcaagatgagaagcttccatttgatctcacattgtgcggttcaaccctaagagcccca
catagttgccatttacaatatatgaagaatatggagtctattgcatctcttgttatggca
gtagtggttaacgagggggatgatgaggtagccagtcctgattctgttcagcctcaaaaa
agaaagagactttggggtttggtagtatgtcataatacaagtccaagatttgttcctttc
cctcttaggtatgcctgtgagtttctagctcaagtatttgccatccatgtcaataaggaa
atagagttggaagatcagatggttgagaagaacatcctgcgcacccaaacgctgttgtgt
gatatgttgttacgagatgcacccttgggtattgtgtcacagagccctaatattatggat
ctagtgaaatgtgatggagctgccctattatacaagagcaagatatggagacttggtata
actccaagtgacttccagcttcatgacatagcctcgtggctcgctgagtaccatatggat
tccacaggtttgagtacggatagtttgtatgacgcagggttcccaggggctcttgctctt
ggtgatgtagtatgtggaatggcagctgtgcggataactgccaaggacatgctcttctgg
tttcgatcccacgctgcggcagaaattcgatggggtggtgcaaaacatgaatctggtgag
aaggatgatggttggaaaatgcaccctagatcatcattcaaggctttccttgaagttgtc
aagtcaaggagcttaccttggaaggactttgaaatggatgcaattcattctttgcagctt
attctgaggaatgcattcaaagatgttgaaactgtggatgtaaaccccaacgcaatccat
gtaaagcttagtgacctaaaaattgaaggcatgcaagaactggaagcagtgacaagcgag
atggtccgtttgattgaaacagccacagttccaattttggcggttgatgttgatgggctg
gttaatgggtggaatacaaaaatttctgagttaactggtcttcctgttgataaagcaatt
ggaaagcatttgctcacgctcgtagaagattcttcaactaaaatggtgaaaaggatgttg
gacttggcgttgcatggcaaagaggaacaaaacatccaatttgagataaaaacacatggc
tctaggagtgaccttggtcccatcagcttagttgtgaatgcttgtgccagcagagacatt
cgtgaaaatgttgtgggggtttgttttgtggcccaggatatcactggtcagaagactgtg
atggacaagttcacccggattgaaggtgattacaaagcaattgtacagaacccaaacccg
ttgatccccccaatatttggtactgatgaatttggctggtgttctgagtggaatccagcg
atgacgaagttaactgggtggaaacgagaggaggtaatagataaaatgctgttgggggag
gtttttgggatcaacatggcctgttgtcctctgaagagtcaagaagctttcgtaaatctt
ggtattgtacttaaccatgccatgacaggtcaggtatccgaaaaggttccttttggtttc
tgtgctcgcagtggaaagcacatagaatgcctgttgtgtgtgagcaagaaattggacagt
gagggctcagtcactggggtgttttgcttcttgcagctggctagcccagagctgcaacaa
gcactccatgtccagcgtttgtcagaacaaactgctgtgaagagatcgaaagaattgtct
tatattaaaaggcagatccggaatcctttagctggtatgatgttttcttggaaaatgatg
gagggtactgagttgggaacagagcagaaacagcttctgcatactagtgcccagtgccag
caccagctcaacaaaatactagatgactcggatcttgataccatcattgacggctacttg
gaactggaaatggtggagttcactttgcatgaagtactgctcgcctcagtcagtcaagtc
atgattaagagcaatgccaagagtatccggattgtccatgacgcagcagaagagatcatg
aatgagaccttgtatggggatagtcttaggcttcaacaagtcttagctgatttcttagcc
gtttcaatttattttatgccaaacggaggccagcttactattgcagccaatttgaccaaa
gatcagttaggacaatccgttcatcttgtgcatttggagctcaggataacacatgcgggt
ggtgggattccggaaggattgctgaaccagatgtttggaaacgacatagccatatctgag
gagggcattggcctgctcgtgagcagtagactggtgaagctcatgaacggagacgtaagg
tatctcagggaagcaggcaaggcaaccttcatcatatccgtggaactcgctgctgcacac
aagttgaggtcctaa
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