KEGG   Prunus avium (sweet cherry): 110770890
Entry
110770890         CDS       T05161                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
pavi  Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pavi04812]
    110770890
Cytoskeleton proteins [BR:pavi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     110770890
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_SPT8 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_EIPR1 eIF2A Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 110770890
NCBI-ProteinID: XP_021830807
UniProt: A0A6P5TUI8
LinkDB
Position
Unknown
AA seq 840 aa
MAKRAYKLQEFVAHSDNINCLNIGKKACRLFVTGGDDHIVNLWTIGKPTSLMSLAGHTSP
VESVAFNSAEVLVLAGASSGVTKIWDLEETKMVRTLSGHRSSCTAVEFHPFGEFFASGST
DTNLKIWDIRKKGCIHTYKGHTQGISTIKFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF
KFHEGRIRSIGFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEPTGVRAIAFHPDGRT
LFSGLDDSLKVHSWEPVICHDSVDMGWSRLGDLCIHDGKLLGCSYYQNSVGVWVADVSLI
KPYAAGSTPVQNDSTAQKPYVKLQETAGKVESGISSPGLRCMSPDYDTKDIKNIYIDSSG
GKPVTSQRMVSPRVVPSLDSKEATAAKQSPSVGLHPKSNEQEVNKSLVVPNIVPRSSPDG
KDTANSGREAVAFSRTRRGMLLKPAHARRASNSKIDFEELPPDVESGKLCNMMSKLDSAM
DLNCQTKIVSEDRARESCEENHSEIKSVEEKFEKVISLKKASNQESRNGSLNCSKEANSV
KFVNGVAVVPGRTRTLVERFERRERFDRNEDQATSITSPVIPEDQATSMTSPVTPEDQVT
SISGPLIPEVEASISSPVIPEVEASISSPVIPEVEASNPSPVIPEREKTSTRLQKEGPQI
SGRHMASTNNGGPSEDLMQTHEVFLSTLRSRLTKLQVVRHFWERNDIKGAIGAIRKLPDH
SVQADVISVLLEKMDILTLDLFSRLLPVLLGLLDSKIERHAIVSLEMLLKLVAVFGPVIH
STISAPPAVGVNLQAEQRLQCCNQCFIQLQKIQKILPVFVRRGGVLARCAQELNLVLQQS
NT seq 2523 nt   +upstreamnt  +downstreamnt
atggctaagcgcgcatataagctgcaggaatttgtggctcattcagacaatattaattgt
ctaaatattgggaaaaaggcgtgtcgactttttgttaccggcggtgatgatcacatagtc
aatctttggacaattggcaaacccacttcgttaatgagtcttgccggtcatacaagtccg
gttgaatccgtagcttttaattcggcagaagttttggtacttgctggagcttcttctggt
gtgacaaaaatatgggatcttgaggaaacaaagatggttcgcacactttctggacataga
tccagctgtactgctgttgaatttcatccatttggtgagttctttgcttctggttccacg
gacactaatctaaagatatgggatattagaaagaagggatgcatccacacgtacaagggt
catactcaaggcatcagtacaattaagttcacgcccgatggtcgctgggtagtttctggt
gggtttgacaatgtagtaaaggtatgggatctaacagctgggaagctcttgcatgatttt
aaattccatgaaggacgtattcgatccataggttttcatccccttgagtttctcttggcc
acaggttcagcagacagaactgtaaaattctgggatttggaaacttttgaactgattgga
tctaccagacctgagcctacaggagtacgcgcaattgcttttcatcctgatgggaggacc
ctgttttctggattggatgacagtttgaaggttcattcatgggaacctgtaatatgtcac
gattctgttgatatgggatggtcaagacttggtgacttatgcattcatgatgggaaacta
ttgggctgctcatactatcaaaattctgttggagtttgggtagcggatgtatcgcttatt
aagccatatgcagctggttctacacctgtgcaaaatgacagtacagctcagaaaccttat
gttaaacttcaggaaaccgcagggaaggtagagagtggtataagtagtccgggcttgcgg
tgtatgtctcctgattatgacacgaaggacataaaaaacatatacattgattctagtgga
ggaaagccagttacctcgcagagaatggtttctccaagagttgtaccctcgttggattca
aaggaagccactgctgcaaagcagagcccttcggtagggttgcatccaaaatctaacgaa
caagaagtcaataaatccctggttgtgcctaatattgtacctcggagcagtcctgatgga
aaggatacagctaactctggaagggaagctgttgcgttttcaaggaccagacgtggtatg
ttgcttaaaccagctcatgcacgaagagcatcaaatagcaaaattgacttcgaggagctg
ccaccggatgttgaatctggaaaactttgcaatatgatgagtaaattagatagtgcaatg
gatcttaactgtcaaaccaaaattgtatcagaagatagggctcgagagtcgtgcgaggaa
aatcattctgagatcaagagtgtagaagagaagtttgaaaaagttatatcgctgaaaaag
gcctctaatcaggaatccagaaatggatccctcaattgcagcaaggaggcaaactctgtt
aaatttgtgaatggagttgcagttgtaccaggaaggactcgcaccctggttgagagattt
gaaaggagagagagatttgatcgtaacgaagatcaagcaactagcataactagtcctgta
atacctgaagaccaagcaactagcatgactagtcctgtgacacctgaagatcaagtaact
agcatatctggtcctctgatacctgaagttgaagctagcatctctagtcctgtgatacct
gaagttgaagctagtatctctagtcctgtgattcctgaagttgaagctagcaaccctagt
cctgtgatacctgaaagggaaaaaacatccaccaggctgcagaaagaaggacctcaaatt
tctgggaggcatatggcctctacaaataatgggggtcctagtgaagatttgatgcaaact
catgaagtttttctcagtacccttcgttcccgcctgacaaaattgcaggtggtgcggcat
ttttgggaacggaatgatattaaaggtgctattggtgctatcaggaagctgccagatcat
tctgtacaagcggatgttattagtgttctccttgagaaaatggatatcctcactttagat
ctcttttctcgtttgcttcctgtgcttctgggcctacttgatagcaagattgaaaggcat
gcaattgtgtcattggagatgctattgaagctagtggcagtctttggcccagtgatacac
tcgaccatttcagcacctccagctgttggtgtcaaccttcaggcagagcaaaggctccaa
tgctgcaaccaatgctttatccagctgcagaagatccagaaaattcttccagtctttgta
aggaggggtggtgtgctggcaagatgtgctcaggaattgaatctagttcttcaacagtca
taa

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