Prunus avium (sweet cherry): 110771141
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Entry
110771141 CDS
T05161
Name
(RefSeq) phytochrome B
KO
K12121
phytochrome B
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110771141
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HisKA
HATPase_c
PAS_4
PAS_9
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
110771141
NCBI-ProteinID:
XP_021831080
UniProt:
A0A6P5TVL8
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MASGAQSSGTGHAKAHNNTESVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSMRTTKD
SVPEQQITAYLSKIQRGGHIQPFGCMMAVDEATFGVIAYSENARDLLDLTPQSVPILEKP
EILTIGTDVRTLFTPSSAVLLEKAFGAREITLLNPIWMHSKISGKPFYAILHRIDVGVVI
DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKILCDTAVESVRELTGYDRVM
VYKFHEDEHGEVVAESKRPDLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVHV
IQDEGLMQPLCLVGSTLRAPHGCHSQYMANMGSIASLALAVIINGNDEEAIGGRNSMRLW
GLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLR
DTPAGIVTQSPSIMDLVKCDGAALYYQGKYYPQGVTPTEAQIKDIVEWLLAFHGSSTGLS
TDSLGDAGYPGAASLGDAVCGMAAAYITKRDFLFWFRSHTGKEIKWGGAKHHPEDKDDGQ
RMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQIILRDSFKDAETNNSKAVTQAQLGDL
EFQGINELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEEATGKSLVH
DLVYKESEEIVDRLLFRALRGEEDKNVEIKMRTFGPEHDNKPVFVVVNACCSKDYTSNIV
GVCFVGQDVTGQKVVMDKFIKIQGDYKAIVHSPNPLIPPIFASDDNTCCSEWNTAMAKLT
GWSHGEILGKMLVGEVFGSCCRLKGPDAMTKFMIVLHNAIGGLDTDKFSFSFFDRNGKYV
QALLTANKRVNAEGQVIGAFCFLQIASSELQQALKVQRQQENECFSRMKELAYICQEIKN
PLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQILKIIEDVDLDSIEDGSLEIEKSEFF
LGSVINAVVSQVMLLLRERDLQLIRDIPEEIKTLAVCGDQVRIQQVLADFLLNMVRYAPS
PEGWVEIHVLPSLKKVADGVTLVRTEFRLVCPGEGLPPQLVQDMFHSSQWMTQEGLGLSM
CRKILKLMNGEVQYIRESERCYFLIILEFPMPRSTKSID
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggtgctcagtcgtcgggcacaggccatgccaaagctcacaacaatacagag
tctgtaagcaaagccattgctcagtacaccgtcgatgctcggctgcacgcggtgtttgag
cagtcaggcgagtctggtaagtccttcgactactcacagagcatgaggaccaccaaagac
tcagtcccggagcagcagattacagcttacctgtccaaaattcaaagggggggccatatt
caaccctttgggtgcatgatggctgtggacgaagccacctttggggtcattgcatacagc
gaaaacgcccgagacctgctcgacctaacgccgcagtcagttccgatcctcgaaaaacct
gagatcctcacaattgggactgatgtccgtacactcttcacgccctccagcgcagttttg
ctcgagaaggcatttggggctcgggagattactcttttgaacccaatttggatgcactcc
aagatttctggtaagcccttttacgcaattctgcaccggattgatgttggggttgtgatt
gatttggagcctgctagaacagaggaccctgcgctgtctatagccggcgcggttcagtct
cagaaattggcagtgagggcaatttcacagctgcagtcactgcctggtggggacattaag
attttgtgtgatactgcggttgagagtgtaagggagcttactggttatgatagagttatg
gtgtataagtttcatgaggatgagcatggtgaggttgtggctgagagcaagaggcccgac
ttagagccatatcttgggctgcactatcctgccacggatatacctcaggcgtcgaggttt
ttgttcaagcagaaccgggtcagaatgatagtagactgtcatgccacgccggtccatgta
attcaggatgaagggctgatgcagcctctgtgcttggttggatccacacttcgtgcccct
catggttgtcactcccagtatatggctaatatgggctccattgcctcgctagctttggca
gtcatcatcaatggaaatgatgaggaagctattggcgggaggaactcaatgagactatgg
ggcctggttgtttgccaccatacctctgctcggtgcattccgtttccccttcggtatgct
tgtgagttcctaatgcaggcctttgggcttcagttgaatatggaattgcaattggcttca
caattgtctgagaaacatgttttgaggacccagactctcttgtgtgatatgcttcttcgt
gacaccccagctggcattgttactcaaagtcctagtattatggaccttgtgaagtgtgac
ggggctgcactatactaccaagggaagtactacccacaaggtgtgaccccgactgaagcg
cagataaaggacattgtggagtggctgttggctttccatggaagttcaacaggtttaagc
acagatagtttgggtgatgctgggtaccccggagctgcctctctgggcgatgctgtttgt
gggatggctgctgcttatatcaccaagagggattttctgttctggttccgatcccacact
ggcaaagagatcaaatggggtggagcaaagcatcatccagaggacaaggatgatggacag
aggatgcatccacgctcttcattcaaggcatttttggaagtggttaaaagccgtagtttg
ccgtgggagaacgcagaaatggatgcaatacactctttgcagattattttgagagactca
tttaaggatgcagagacaaacaattcaaaagctgttacgcaggcccagcttggtgatctg
gagtttcaagggatcaatgagctcagctcggtagcaagagaaatggttagattgatagag
actgcaactgcccccatatttgctgtagatgttgatggatgtataaatgggtggaatgca
aaggttgcagagttgacaggtctctcagtcgaggaagctactgggaagtccttggttcat
gatcttgtttacaaagaatctgaagaaattgttgacaggcttcttttccgtgctttaaga
ggagaagaagataagaatgtagaaataaaaatgaggacatttggcccagagcacgacaac
aaacctgtatttgtggtggttaatgcttgctgtagcaaggattacactagcaatatagtt
ggagtttgcttcgttggtcaggatgtaactggtcaaaaagtagtaatggacaagttcata
aaaatacaaggtgattacaaggccatcgttcatagtccaaaccctttgatccctcctata
tttgcttcagatgataacacatgttgctcggaatggaacactgccatggcaaagctcact
gggtggagccatggagaaatccttggaaaaatgttggttggagaggtcttcggcagttgc
tgtcgactcaagggtccagatgctatgacaaaattcatgattgtcctacacaatgccatt
ggagggctagacacagacaaattttccttttcattctttgaccgaaatgggaaatatgta
caagctctcttgacagccaataagagggtgaacgcagaaggtcaggttattggagctttc
tgctttttgcagattgcaagttcagaactgcagcaagctcttaaagttcagaggcaacag
gaaaatgaatgtttttctaggatgaaagaattggcttacatttgccaggaaataaaaaat
cctttaagtggtatacgctttactaactcacttttggaggctacagacttaactgaagat
caaaagcagtttttggagaccagtgctgcttgtgagaagcaaattttgaagattatagaa
gatgttgatctggatagcattgaagatggatcactggagattgagaagtcagaattcttt
cttgggagtgtcataaacgctgttgttagccaagtaatgttattgctgagggaaagggat
ctacaattgattcgggatattcctgaagaaatcaaaacattggctgtttgtggtgatcaa
gtgagaattcagcaggtcttagctgatttcttattgaatatggtacgttatgcaccatcg
cctgaaggctgggtggagattcatgttcttccaagcttgaagaaagtagctgatggagtc
actctggttcgtactgaattcaggttggtttgtcctggtgaaggtcttcctcctcaatta
gttcaggatatgttccatagcagtcaatggatgactcaggagggcctaggactgagcatg
tgcaggaagattttaaagctcatgaatggagaagtccaatatatcagagagtcagagaga
tgttatttcttaattattcttgagtttcctatgcctcggagtacaaagagtattgactag
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