Prunus avium (sweet cherry): 110771370
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Entry
110771370 CDS
T05161
Name
(RefSeq) aladin isoform X1
KO
K14320
aladin
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110771370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110771370
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110771370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
DUF7397
Beta-prop_WDR90_POC16_2nd
Sod_Fe_N
KTSC
PD40
Motif
Other DBs
NCBI-GeneID:
110771370
NCBI-ProteinID:
XP_021831355
UniProt:
A0A6P5TWE0
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MPSFPHPGSVSICEINRDLITAESLSDDVAKDTYGKILGMVFSPVPFQPDQLARPPSPDQ
DDQQVATTASTKGLLQNLQGILNRSLTPLFHPNHVNLLPEVDLQGVSWHQHKHIIAFISG
PNQVIVRDFEDSEGKEPCILANESQREVKVLEWRPNGGRQLSVACNGGICIWAASFPGSA
ASVRSGASSFLGTLSRGSGVRYTLVDFLRSHNGEQISALSWSPDGRYLASGSYESSSFTI
WDVAQGLGTPIRRGLGGISMLKWSPTGDYFFSAKFDGTFYLWETNTWTSEPWSSTSGFVK
GASWDPDGHMILLAFSKSSTLGSIHFASKPPSLDAHLLPVELPEIMSLTNSQTIEKIAWD
ASGERLAVSFKDGDELYRGLIAIYDVRRTPLISASLIGFIRGPGDNPKPLAFSFHDKFKQ
GPLLFVCWSSGFCCTYPLIFRSHVLP
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgccttcctttcctcatcctggttctgtctccatatgcgaaatcaatcgcgacctcatc
actgctgagagcctctcggatgatgtagccaaggacacttatggaaagattcttggaatg
gtattcagtccggttccatttcagccggatcagctggcgcggccaccaagccccgaccag
gacgaccaacaagttgcaacgacagcttcaacaaagggacttctacaaaatttgcagggg
atcctcaaccgctctctcacacctctcttccatcctaatcatgtaaacttgttaccagaa
gttgatcttcaaggagtcagctggcaccaacataaacatattatagcatttatatctggc
ccaaatcaagttatagttcgtgatttcgaggattcagaagggaaggagccatgcattttg
gctaatgagtcccagagagaggtcaaggtacttgagtggaggccaaatggtgggagacaa
ctttccgtagcatgcaatggtggaatttgcatttgggctgcttctttcccgggaagtgca
gcctctgtcagatccggtgcttcttcattcttgggaactctctctagaggttctggagtc
cgatatactttggtggattttcttcgaagtcataacggggaacagatcagtgcactgtca
tggagtcccgatggaagatatttggcatctggctcttatgagagctcgtcatttaccata
tgggatgttgctcaagggcttgggacacccattagacgaggactaggtggcatatcaatg
ctgaagtggtcgccaactggggattactttttctcagcaaaatttgatggaacattttat
ctctgggagacaaacacatggacatctgaaccatggtcttcaactagtggcttcgtcaag
ggagcatcatgggatcctgatgggcatatgatacttctcgctttctctaaatcttcaaca
ttgggttccattcactttgcttcaaagcctccatcacttgatgcgcacttattacctgtt
gagctaccagagattatgtccttaacaaacagtcagaccattgagaagatagcttgggat
gcttcaggagagcgtttggctgtatcttttaaagatggtgatgagttatacagaggtctt
attgccatttatgatgttagaaggactcctctaatatctgcatcattgattggatttatt
agaggacctggggacaatccaaagccgttggcgttttcatttcatgacaagtttaaacag
ggaccattgctttttgtgtgctggagtagtggattttgctgtacctaccctctcatattt
cgttcccatgttcttccctag
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