Prunus avium (sweet cherry): 110771480
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Entry
110771480 CDS
T05161
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110771480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110771480
Enzymes [BR:
pavi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110771480
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
110771480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
110771480
NCBI-ProteinID:
XP_021831477
UniProt:
A0A6P5TWC4
LinkDB
All DBs
Position
Unknown
AA seq
1674 aa
AA seq
DB search
MAASEVPTTSVDAIRFGFFTDEEVRKHSFVKVTSPILFDDSTRTPVNGGLYDKAMGPLGD
ERGQICQTCGQTAYTCSGHCGHIDLVLPAYNPLLFNILHKLLQRTCFFCYHFRTSRQHVE
KHVSQLKLIMKGDVLGAKRLESDSPSEYSDCNGSGNHIDNDLKQQGWTSLQFTEIMSVLD
KALPTHGKECKNCKAKNPKISKPTFGWFQMSGSDHARENVLRGCNLEGPLTGQDEEASML
EDENFNNVATRMQKGQGSKVLSEFFKQKNSLSGDLLPTEVKEIIRLLWENESQLCSFISD
IQCQETGTNGGHSMFFLETVLVPPIKFRPPSKGGDSVMEHPQTVLLSKVLEANVSLSQTL
TNLEHSRTIRRWRDLQESINVMFNSKTAAGQGQRDAAPGICQLLEKKEGLFRQKMMGKRV
NFACRSVISPDPYLAVNEIGIPPYFATRLTYPERVTPWNVDKLRNAIVNGSEIHPGATQY
VDKSGPKILRQNRRERISISRKLPSSKGAVMQHGKVSDNDIESKIVHRHLRDGDIVLVNR
QPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRSEAYNIV
NANNQYVKPTSGDPIRALIQDHVISAVLLTKKDTFLRWDQFNQLLYSSCVSARVSDAFSG
KPDKKVFMFNSEGTMQPLLPAIWKPERLWTGKQVITALLNHITRGSPPVTVERDAKIPRG
FFNCKNVEGEDNSGKDGQQKKRKPSKEQATDKDNSKEKEEPDENHLLIYRNNLVRGVIDK
AQFGDYGLVHTVQEFYGSDTAGKLLSVLSHLFTVYLQTHGFTCGIDDLLLLESKDAKMKD
QLESCEDVGENVYRDFIEVKDVKRKDPVELQLNIENFIRSNGESALASLDRRMISQLNNK
TSNSDVFKQLLLRGLSKPSVKNCIYLMTTSGAKGSVANLQQITSYLGQQELEGKRVPQMI
SGKTLPCFPPWDWSSRAGGFIIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQR
CIIKNLECLKVSYDNTVRDADGSIIQFRYGEDGIDVHMTSFIQKFESLIANKEMFHKKGC
RQMDKLNPYIKDLPLALKEKAEKFVHNLALKEKDQNFQEDFLKLMEHKYLCSLAQPGEPV
GVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAANDIKTPVMTCPLQKG
RSKEEAQQLADKLKKITVADIIESMKVTFVPFSIQDGQTCRIYKLEMTLHIPEHLQTIVE
YSSEDWEEILETLFVRELEDAIQNHILLLSKISGIKNFMPDSQPKASNETDENRSEKISQ
REEEDDDNGGADDGEHGEGVEDFGLDAHKRKLQATDEMDYEDGCDDEVREADLSDGDESE
IDEEESEVEIGVIDASDEMPGSPLEEAGDLAKPKSKEKKTKSGTQIRKKRKVRAEMVKKE
TDRAIFVSAKGFHFEVHFRFTDNEPHILLSQIAQKTAQKVYIQRSGKVADCKQITCDENQ
VLCFGKDPENKQSFSSKEKKEMAALQTTGIDFGTFWKLQDVLDVRYIYSNNIHAMLNTYG
VEAARETIIREINNVFKSYGISVNIRHLTLIADFMTHAGGYRPLNRFGGIVESISPFNKM
TFETASKFIVEAAYHGQVDRLETPSARICLGLPVNVGTGCFDLMHKMEVECTQR
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcagaggttccgacgacgtccgtggatgcgattaggtttggcttcttcacc
gacgaagaggttcggaagcacagctttgtgaaggttaccagcccaattttgttcgatgac
tcaacacgtacgcccgtgaatggtggcctttacgacaaggcgatgggcccactcggggat
gaacgcggccaaatttgccaaacgtgtggtcagacagcatatacgtgctcgggtcattgt
ggtcatattgaccttgttttgccagcttataatcccttgctgttcaacattcttcacaaa
cttctacaaagaacctgtttcttctgctaccatttccgtacaagccgacaacatgttgag
aaacatgtttcccaattgaaactcataatgaaaggtgatgttcttggggctaaaaggtta
gagtccgactcacctagtgaatactcagactgcaacgggagtggtaatcacatagacaat
gatttgaagcagcaaggatggacttctcttcagtttacggagataatgtctgttttggat
aaggctttgccgacgcatgggaaggagtgcaagaattgcaaggctaaaaatcccaaaatc
agtaaacctacttttggatggttccaaatgagtggcagtgaccatgcgagagaaaatgtc
ctcagagggtgcaacctggagggacccttgactggtcaagatgaagaggcatctatgctt
gaggatgagaattttaacaatgttgctacaagaatgcaaaaaggacaagggagcaaagtg
cttagtgagttctttaagcagaaaaattccttgtcgggagatctacttccaacagaggtt
aaagaaattattaggcttctgtgggaaaatgaatctcaactctgctcttttattagtgat
atccagtgccaagaaactggaacaaatggaggtcactctatgtttttcttggagactgtt
cttgtaccaccaatcaaattccgtcctccatccaagggtggcgattctgtgatggagcat
cctcaaaccgtcttattaagtaaggtgctggaggcaaatgtttctttgagccaaactctt
accaacttagagcactcaaggacaattcgacggtggagggatcttcaagagagtataaat
gtgatgttcaatagcaaaactgctgccggtcaaggtcaaagagatgcggctcccggaata
tgtcagttgcttgagaagaaggaaggcctgttccggcagaaaatgatgggcaaaagggta
aattttgcgtgccggtctgtcatatctccggatccctacttagctgttaatgagattggg
attcctccatactttgcaacgagactaacatatcctgagagagttactccgtggaatgtt
gacaagttgaggaatgctattgtcaacggttctgaaatccatcctggagctacacaatat
gttgataaatctggtcccaagattttgaggcaaaacaggagagaacgcatttcaatatca
agaaaattgccttcttcaaaaggggctgtcatgcaacatgggaaggtctctgataatgac
attgaaagtaaaatagtacatcgtcacttgcgagatggggatattgtgcttgtcaatcga
cagcctacacttcacaaacccagtataatggcgcatgtagttcgtgtattgaagggggag
aaaacaattcgcatgcactatgctaattgcagtacttacaatgctgattttgatggtgat
gagatgaatgttcattttccgcaagatgaaatttcccgttcggaagcttacaatattgta
aatgcaaataatcaatacgtaaagccgaccagtggagatcccattagagccttgattcag
gaccatgttataagtgctgtcctccttacaaaaaaggatacatttttacgttgggatcaa
tttaatcagcttctttacagttcttgtgtttcagcccgtgtgtcagatgctttctctggc
aaaccggataaaaaagttttcatgtttaactctgaaggcacaatgcagccccttcttcct
gcaatttggaaaccagagcgcctttggacaggaaagcaggtcatcactgccttgctaaat
catattactagaggttctccaccagttactgttgaaagagatgcaaaaatcccacgtggt
ttttttaattgtaaaaatgttgaaggagaagataattctggtaaagatggacaacaaaaa
aagaggaaaccaagcaaagaacaagcaactgataaagataactcaaaggaaaaagaggag
cctgatgagaaccatttattaatatatagaaacaacttagtgcgcggcgtgattgacaag
gctcagtttggtgattatggtttggtccatacagttcaggagttctatggctcagatact
gcaggaaaattgctttctgtattgagtcatttatttacagtgtatttgcagacgcatggg
ttcacgtgtgggattgatgatctcttgctattggaaagcaaagacgcaaaaatgaaggat
caactagaaagttgtgaagatgtgggtgaaaatgtttaccgtgattttatcgaggtcaaa
gatgttaagagaaaagatccagtggaactgcaattaaacatcgaaaattttatacggagt
aatggagaatctgccttggcatccttggataggagaatgattagtcagcttaataacaag
acctccaactctgatgtgttcaaacaattattgttgagggggttatcaaaaccgtctgtt
aaaaattgtatctatcttatgacaacatctggggctaaaggtagtgtggctaatctccaa
caaataacttcatatttgggtcagcaagagctagaaggcaaacgggtccctcaaatgatt
tctggaaagaccttaccgtgctttcccccatgggattggtcatctcgagcaggaggcttt
atcattgatcgttttcttactggtcttcatcctcaggagtactatttccattgcatggct
ggccgtgaagggttggttgatacagctgtcaaaacatctcgtagtggatacttgcaaaga
tgtataataaaaaatcttgagtgcctaaaagtttcttatgacaataccgtccgtgatgct
gatggttccattattcaatttcgttatggagaagatggcattgatgtccatatgacgagc
tttattcaaaagtttgaatccctgatagctaataaagaaatgtttcacaagaaaggttgt
cgtcaaatggataaattaaatccttatattaaagacttgcctttggctctcaaagaaaaa
gcagagaagtttgtgcataatttggccttgaaagagaaagatcaaaacttccaagaggat
ttcttgaagttaatggagcacaaatacctatgtagtcttgctcaacctggagaaccagtt
ggtgttcttgccggtcagtctgtaggagaaccgtcaacacagatgacactgaatactttc
catcttgcgggacgaggtgaaatgaatgtgacccttggaatcccacgcctccaagagatc
ttgatgactgctgcaaatgatattaagacgccggttatgacatgcccattgcaaaagggg
agatcgaaggaggaagcccagcagctagctgataagttgaagaaaatcactgtggcagac
ataattgagagtatgaaagtaacctttgtgccattttccattcaggatggtcaaacttgc
cgtatttataagcttgagatgacactccacatacctgaacatcttcaaaccattgttgaa
tattcatcagaagattgggaggaaatcctagagactctgtttgttagggagttggaagac
gccatacaaaatcatattcttttgctttctaaaattagtggtattaaaaatttcatgcct
gattcacaaccgaaggcatcaaatgagacagatgaaaatcgttctgaaaaaatatctcaa
cgtgaggaagaagatgatgacaatggtggtgcagatgatggtgaacatggtgaaggggtc
gaggattttggtctggatgcacataagcgaaagctacaagctacagatgagatggattat
gaagatggctgtgatgatgaagtgagagaagcagacttgtcagatggagatgaaagtgaa
attgatgaggaggaaagtgaagttgaaattggggttatcgatgctagtgatgaaatgcct
ggaagtcctttagaagaagctggggacctagctaagcccaagtcaaaggagaaaaagacc
aaatcgggaacccaaattagaaagaaaaggaaggtccgagcagagatggtaaaaaaggag
actgacagggcaatttttgtatcagcaaaggggtttcacttcgaggtccattttagattt
accgacaatgaacctcatattttgctgtctcagattgctcagaagacagcccagaaggtt
tatatacagagatctggaaaggttgcagactgtaaacaaattacttgtgatgaaaatcaa
gtcctctgctttgggaaggatcctgaaaataaacaaagtttttcatccaaggaaaaaaag
gagatggcagctctgcaaactactggaattgatttcggtacattttggaaactgcaagat
gttcttgatgtcaggtatatttattccaataacatacatgcgatgctgaacacttacgga
gtagaagccgccagggaaactatcatccgagaaataaataatgttttcaagtcttacgga
atatccgtcaacattaggcatcttacactaatagctgactttatgactcatgctggtggt
tatcgtccattgaatcgatttggaggcatcgtggagtcgatatctccgtttaataaaatg
acttttgagacagcttccaagttcattgttgaagcagcatatcatgggcaggtggatcgc
ttagaaaccccatctgctaggatctgtcttggattgccagtcaatgtgggtactggatgt
tttgatttgatgcacaagatggaggttgaatgcacacagagatag
DBGET
integrated database retrieval system
