KEGG   Prunus avium (sweet cherry): 110771961
Entry
110771961         CDS       T05161                                 
Name
(RefSeq) RING finger and transmembrane domain-containing protein 1-like
  KO
K28516  E3 ubiquitin-protein ligase RNFT2
Organism
pavi  Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pavi04121]
    110771961
Ubiquitin system [BR:pavi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110771961
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-rbx1 zf-RING_5 Prok-RING_4 zf-RING_6 zf-C3HC4_4 zf-RING_16 zf-ANAPC11 Caps_synth_CapC DUF1451 zf-RING_10 zf-Nse Sina_RING
Other DBs
NCBI-GeneID: 110771961
NCBI-ProteinID: XP_021832007
UniProt: A0A6P5TXW8
LinkDB
Position
Unknown
AA seq 472 aa
MEAPGGHLDSFRAASGNSSSRRYGMLSASNIIQAPLSALLEYSGLLRGRSNHQESESLIN
GRSAAAFRDHHRSQLDQSPTTSNDGEVSIRIIGAGEQEHDREGAGLVVGQLREVTVPPNE
VSASPMAGVASVSLTTEEGQTDGRTDRSSGEGMPQSLNGSADGEGVDGAGSNGRDSSYQR
YDIQQAARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNDILRKQTALKGERK
VAVLIGISLAFALHVVGVYWWYQNDDLLYPLIMLPPKLIPPFWHAVFIIMVNDTLVRQAA
MVLKCILLIYYKNSRGRNYRKQGQMLTLLEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS
LMTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVNAAGDLCAICQEKMHA
PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggaagcgccgggtggccatctggactcgtttagagctgcttcgggaaatagtagttct
agaagatatggaatgttatccgcttccaatatcattcaggcaccactttctgccttgttg
gagtactcgggtcttctccgtggccgctctaatcaccaagaatctgaatctttaattaac
ggccgtagcgctgctgctttccgggatcaccatcgtagtcagctggaccaatctccaacc
acaagcaacgacggggaggtttccattaggataattggtgcaggggagcaggagcatgac
agggaaggcgcagggttagtagttggacagttgagggaagtaactgttcccccaaatgag
gtttctgcatcaccaatggcaggggtggcgtctgtgtcattgacaacagaggagggtcag
acagatggcagaacagatcgtagttcaggagagggcatgccccaatcgttaaatggaagt
gctgacggagaaggagttgatggagctgggtctaatggcagagattcttcttaccagaga
tatgacattcagcaggctgctaggtggattgagcaggtccttcccttttctttgcttcta
ttggtggtcttcatccgccagcatttgcagggtttctttgttacaatttggattgctgct
gttatgttcaagtcaaatgatattctaaggaaacagacagctttgaagggagagaggaaa
gtcgcagttctaatcggcatctctcttgcatttgcattgcatgtggttggtgtttactgg
tggtatcagaatgatgatcttttgtacccattaattatgcttcctcctaaacttatacca
ccattttggcacgctgtttttatcatcatggtgaatgacaccctggtccggcaggcagca
atggtgctcaagtgcattctattaatatactacaaaaacagcagaggccgaaactatcgt
aagcagggtcaaatgcttactctgcttgagtatttactgctcttgtaccgtgccttgttg
ccaacaccagtgtggtatcgtttcttcttgaacaaagaatatgggagtctcttttcatca
ctaatgacagggttatatttgactttcaagctcacatctgttgttgagaaggtgcaatcc
ttctttgctgcattgaaggcattgtcacgtaaagaggtgcactatggggcatatgcaaca
tcagaacaggtcaatgcagctggcgatctatgtgcgatttgccaggagaagatgcacgct
cctatcctacttcgatgtaaacacatcttttgcgaggactgtgtatcagagtggtttgag
agagaacggacgtgcccattgtgcagagctttggtaaaacctgcagatcttagatcattc
ggtgatggatcaacgagtttgtttttccagctgttctga

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