Prunus avium (sweet cherry): 110772019
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Entry
110772019 CDS
T05161
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110772019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pavi04121
]
110772019
Enzymes [BR:
pavi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110772019
Ubiquitin system [BR:
pavi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
110772019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DNA_pol_phi
BUD22
RNA_pol_3_Rpc31
CDC45
Cwf_Cwc_15
Nop14
zf-C3HC4_2
zf-RING_UBOX
Myc_N
Motif
Other DBs
NCBI-GeneID:
110772019
NCBI-ProteinID:
XP_021832073
UniProt:
A0A6P5TWA5
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MARFALGGDEDGEGEGSRIPRPKKPRLAPNLLPQYPAARIAIIEQQPPQPPQPQSQQLRT
VEEDEEADEESEGEEEESESEVEADEESEEEDEDEEEDEEGEEEITVGFEQQVGNSYHIR
VPRTIDRFNRPVRLLGQNRTAQANPQVGSASASLTSNAGVQEGGPPPISHVTDGLLVRLF
GQNRTAQANPQVGSASASLTSNAGVQEGDPPPISPVTDGSLVFTLADPEVLDCLICYEPL
TIPVFQCENGHIACSSCCTKSKNKCPSCSMPIGYNRCRAIEKILESIRISCQNIKHGCKE
MVTYNKKNEHEKACMYSPCSCPLSGCNFISSSKQLYLHFTVSHVDYATRFQYGINFSITL
NIKDKFLVLQEKRGGVLFILDNHAEKLGNLVSLRCIQPTFKGGFYYDLLAKTNGSSLRFQ
SFTKNSAGQVISPSSTGYFIIPTDFFSSGKLNMDLCIWHNGRCPASFQSIGVA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcgagattcgcgttaggtggagatgaagatggagaaggcgaaggatcccgtattccc
aggcccaagaagcctcgtctcgctcctaatctccttcctcaatatcccgcagcccgcatc
gccataatcgaacaacaaccaccacagccaccgcaaccacaatcgcagcagctacggact
gttgaggaagatgaagaagcagatgaagaatccgaaggagaagaagaggagagtgaaagc
gaagtagaagcagacgaagagagtgaagaagaagatgaagatgaagaagaagacgaggaa
ggagaagaagaaatcaccgttggcttcgaacagcaagtcggaaattcctaccacatacgg
gtgccgcggactatcgacagatttaacagacccgttcgtttgcttggtcagaaccgcaca
gcacaagccaacccccaagtgggttctgcttcggccagccttacatccaacgccggagtc
caagagggcggtcctcctccgatctcacacgtcaccgatgggttgcttgttcgtttgttt
ggtcagaaccgcacagcacaagccaacccccaagtgggttctgcttcggccagccttaca
tccaacgccggagtccaagagggcgatcctcctccgatctcacccgtcaccgatgggtcg
cttgtcttcaccttagccgacccagaagttcttgattgcctcatttgctatgaacccttg
accatccctgtcttccagtgtgaaaatgggcatatagcttgctcctcttgctgcaccaag
agtaaaaataaatgcccctcctgttccatgcccattggctataatcgttgtcgggccatt
gagaagattctggaatcaattagaatttcatgccaaaacatcaagcatggctgcaaagaa
atggtaacttacaataaaaaaaatgaacatgaaaaggcatgtatgtattcaccttgttca
tgccccctttcaggctgcaactttatctcttcaagcaagcagttatacctacacttcacc
gttagtcatgtggattatgcaacacgcttccagtatggcatcaatttttccatcacctta
aatattaaggacaaatttcttgttctccaagaaaagagaggaggtgtattatttatcctt
gacaatcatgctgaaaaacttggaaatttagtgtcgcttcgttgtattcaacccaccttc
aagggaggcttctactatgatcttcttgctaaaaccaacggaagttctctcagattccag
tccttcacaaagaactctgcaggccaggttattagcccatcttcaacaggttactttata
atccctactgattttttcagttctggcaagctcaacatggatctctgcatatggcataat
ggtcgatgcccagcatcctttcaaagtattggtgttgcttaa
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