Prunus avium (sweet cherry): 110772036
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Entry
110772036 CDS
T05161
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110772036
Enzymes [BR:
pavi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110772036
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
110772036
NCBI-ProteinID:
XP_021832103
UniProt:
A0A6P5TWC5
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Position
Unknown
AA seq
642 aa
AA seq
DB search
MPPIGVKLLIQDRHVMMDNGIVQVTLSNPDGIVTGIRFNGIDNLLEIRNEEINRGYWDLV
WSSATTGTTGIFDVIKGTSFTVIMESEEQVELSFTRAWDPSQEGKLVPLNIDKRFIMLRG
SSGFYSYAIYEHLREWPAFQLGETRIAFKLRKDKFHYMAMADNRQRNMPLPDDRLPSRGQ
ALAFPEAVLLVNPVEPELKGEVDDKYQYSCDNKDNKVHGWICTEPPVGFWQITPSNEFRS
GGPFKQNLTSHVGPTTLAMFLSAHYSGEDLVPKFAAGEQWKKVFGPVFMYVNSAYEGDDP
LSLWEDAKSQMMMEVQCWPYSFPASEDFPKSHQRGSVSGRLLIRDRYISDDYISAQSAYV
GLAPQGDVGSWQRECKNYQFWTTADENGYFLIDGIRTGDYNLNATVPGFIGDYQYDVVLT
ITSGCEVEMGDLVYEPPRNGPTLWEIGIPDRSAAEFYVPDPNPKYINKLFVNHPDRFRQY
GLWERYSELYPDKDLVYTVGVSDYSEDWFFAQVNRKKDDNKYQGTTWQIKFNLDTVDQSG
PYKLRLAIASATLSELQVRVNDPKAYPPLFSSGVIGRDNSIARHGIHGLYWLFNVDIPSS
RIIEGDNIIYLTQPRSTSPFQGIMYDYIRLEGPPSPSSERET
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgccacctattggggtgaaattactcattcaagatcgccatgtgatgatggataatggg
attgtccaagtgacattatcaaacccagacggaatagtcactggaattcgattcaatggc
atcgataacttgctggagattcgtaatgaggaaattaacagagggtactgggaccttgtt
tggagttcagccactactggaacaacaggaatatttgatgtgataaaaggaacaagtttt
acggttataatggaaagtgaagaacaagttgagctctctttcacaagagcctgggatccc
tcccaagagggcaagctcgtacccttaaatattgataaaaggttcattatgcttcgaggt
tcctcaggcttctactcctacgccatttacgagcacttgagggaatggcctgctttccag
cttggagaaaccagaattgcgttcaaactcaggaaagacaagtttcactatatggccatg
gcagacaataggcaaagaaacatgccattgcctgatgaccgtttaccgtcgagaggccaa
gccctagccttcccagaggcagttcttcttgtcaatcctgtggagccagagctcaaagga
gaagtggatgacaagtaccaatactcatgcgacaacaaggataataaagtacatggttgg
atatgcactgagccaccagtaggattctggcaaattacaccaagcaatgagttccgatct
ggtggaccctttaaacagaaccttacctcccatgttggccccaccactcttgcgatgttt
ctaagcgctcattattctggagaggatttggtgccaaaatttgcagcgggtgagcaatgg
aagaaagtttttgggccagtttttatgtatgttaattctgcatatgaaggagatgacccg
ctttcgttatgggaggatgctaaatcacagatgatgatggaagtccaatgctggccctac
agtttcccagcatctgaggattttcccaagtcacaccaacggggtagtgttagtggtaga
ctacttattcgagacagatatatcagcgatgactacatatcagcacagagtgcatatgtt
gggttagccccgcaaggagacgttggatcgtggcaaagagaatgcaagaactatcaattc
tggacgacagcagacgaaaatggctactttctcatcgacggcatacgcactggcgattac
aatcttaatgcaacggtccctggttttatcggagattatcaatacgatgtcgttctcact
ataacctcaggttgtgaggttgagatgggtgatcttgtgtatgagcctcctagaaatggc
cctactttatgggaaataggtattcctgatcggtctgctgcagagttttatgttcctgac
cctaatccaaagtacattaacaaactctttgtcaaccatccagacaggtttaggcaatat
ggattgtgggaaagatactcagagttatatcctgataaagacttggtttacacagttggt
gtcagtgactatagcgaagactggttcttcgctcaggttaacaggaagaaagatgataat
aaatatcaaggaactacttggcaaatcaaattcaatcttgacactgtggaccagagtggt
ccctataagctgagactagcaattgcatcagcaactctctctgaattgcaggttcgggta
aacgatccaaaagcataccctcctcttttctcaagtggggtgataggtagggacaattca
atagcaaggcatggaattcatgggctatattggcttttcaatgtcgacatacctagctct
cgaattattgagggagataatattatctatttgacgcaaccaagaagcacaagccctttt
caagggattatgtatgattacattcgtttagaaggccccccatcaccaagttccgaaaga
gagacttga
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