Prunus avium (sweet cherry): 110772090
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Entry
110772090 CDS
T05161
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110772090
Enzymes [BR:
pavi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110772090
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Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
110772090
NCBI-ProteinID:
XP_021832172
UniProt:
A0A6P5TYB3
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All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MSTAGVRLHIQGGHVVMDNGILQVTLSNPDGIVTGIRYNGIDNVLEPLNKETNRGYWDLV
WSAPGSKGIFDVINGTSFRVIVNNEEQVEVSFTRMWDPSLEGKYVPLNIDKRFVMLRASS
GFYSYAIYEHLKDWPDFEIGETRITFKLRKDKFQYMAVSDNRQRYMPLPDDRLPGRCQTL
AYPEAVLLQNPKMKELAGEVDDKYQYSCENKDNKVHGWICTNPPVGFWQITPSDEFRSGG
PHKQNLTSHVGPTTLAMFLSGHYAGQDLVPKFRGGEPWKKVFGPVFIYLNSSAIKDDPFW
LWEDAKIQMMTEVQSWPYSFPASEDFQKSDQRGNVSGRLLVLDRYICEELIPANGAYVGL
APPGDVGSWQRECKDYQFWTRADDRGYFSISNIRTGTYNLYAWVPGFIGDYRHDAVINIT
SGSFIEMGDLVFEPPRDGPTLWEIGIPDRSAAEFYVPDPDPNHINKLFVNHPDRFRQYGL
WNRYAELYPHEDLVYIVGVSDYAKDWFFAQVPRQKENGHEGTTWQIKFELRNVDRNSTYK
LRVAIASATLAELQVRINDPNSRRPLFTSGLIGRDNSVARHGIHGIYWLYNVNVPGAQLV
DGTNTFFFKQPRCTSPFQGLMYDYIRFEGPPSCGSSSS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgcaggggtgaggctgcatattcaaggtggccatgtggtgatggataatggc
atactccaagttaccttatcaaacccggatggcattgtcactggaatacgatataacggg
attgataatgtgcttgaacctctcaataaggaaactaacagagggtattgggaccttgtt
tggagtgcaccaggaagtaaaggaatatttgatgtgataaacggtacaagttttagagtt
attgtgaacaatgaggagcaggtcgaggtctcatttacaagaatgtgggatccctccctt
gaggggaaatatgttccactaaacatagacaaaaggtttgtgatgctgcgtgcttcctcg
ggcttctactcctatgcaatttatgagcacttgaaggattggcctgatttcgagattggt
gaaactagaataaccttcaaattgagaaaagacaagttccaatacatggctgtatcagac
aacaggcaaaggtacatgcccctacctgatgaccggttaccaggaagatgccaaacactg
gcctacccagaagcggtcctacttcaaaatcccaagatgaaagagcttgctggagaggtg
gatgacaagtatcaatactcatgtgagaacaaggataataaggttcatgggtggatatgc
accaacccaccagttgggttctggcagatcacacccagtgatgaattccgatcgggtgga
cctcacaaacagaacctaacctcacatgtcggccctaccactcttgctatgtttctgagt
ggtcattatgcgggacaagatctggtgccaaaatttagaggcggtgaaccatggaagaag
gtttttggccctgtttttatctatcttaattcttctgcaattaaagatgatccattttgg
ctatgggaggatgctaaaatacagatgatgacagaagtacaaagctggccatatagtttc
ccagcttctgaggatttccaaaagtcggatcaacggggtaatgtgagtggtagactactt
gttttggacaggtatatttgtgaagaactcataccagcaaatggtgcgtatgttggtctg
gccccaccaggagatgtaggatcatggcaaagagaatgcaaggactatcagttctggacg
agggcagatgaccgtggctatttttcgattagcaacatacgtactggcacatataatctt
tatgcatgggtacctggttttattggagattatcggcatgatgctgtcattaacataacc
tcaggttcttttattgaaatgggtgatcttgtgtttgaacctccaagagatgggccaaca
ttgtgggaaataggcattccggatcgttctgctgcagagttttatgttcctgatcctgat
ccaaatcatattaacaaattgtttgttaatcatcctgacaggttcagacaatatgggctg
tggaacagatatgctgagttatatcctcatgaggacttggtgtacattgttggtgttagt
gattatgctaaagattggttctttgctcaggttcccaggcaaaaagagaacggacatgaa
ggaacaacatggcaaattaagtttgaactaagaaatgtggataggaacagcacctataaa
ctacgagtggcgattgcatctgcaactcttgctgaattgcaggttcggattaacgatcca
aattcgaggcgacctctgtttacaagtggattgatagggagggataactcggttgcaaga
cacggaattcatgggatttactggctgtataacgtgaatgtaccaggggctcagctcgtt
gacgggactaatactttcttcttcaaacaaccaaggtgcaccagtcctttccaaggactc
atgtatgattatattcgatttgaaggtcccccatcttgtggttcgagttcatcttag
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