Prunus avium (sweet cherry): 110772092
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Entry
110772092 CDS
T05161
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110772092
Enzymes [BR:
pavi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110772092
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarbopepD_reg_2
CarboxypepD_reg
BsuPI
Motif
Other DBs
NCBI-GeneID:
110772092
NCBI-ProteinID:
XP_021832175
UniProt:
A0A6P5TYQ7
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All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MSSQRVQMDIQDRHVVMDNGILQVTLSKPDGIVTRIQYNGIDNLLEVLSDEVDRGYWDLV
WSEAGSVGTTGTFDVIKGTKFEVIVESDEQVEVSFTRKWNPSQKGKLVPLNIDKRFIMLR
NSSGFYSYAIYDHLKEWPPFNLPQTRIVFKLRKEKFQYMAIADNRQRYMPLPDDRSQERS
KVLDVPEAVLLVNPIEPEFKGEVDDKYEYSSENQNLRIHGWICMDPPVGFWQITPSDEFR
SGGPLKQNLTSHVGPYCLAMFLSAHYSGEDLVLKLKPDEPWKKVFGPVFIYLNSATSNAN
DDPSPLWEDAKHQMMTEVQKWPYDFPASSEFPPSDQRGNVSGRIQVRDRYVSEDCIPGKG
AYVGLAPPGDAGSFQRDCKGYQFWTRADEHGYYSIKNIREGQYNLYAWVPGFIGDYRYDA
AINITAGCDSDVGELVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPNYINKLYVNHPDRF
RQYGLWERYADLYPDQDLIYTVGTSDYAKDWFFAQVTRKKDDDTYEGTTWQIKFQLDNVN
KSGTFKLRISLATANIAELQIRINDPKADPPLFTTGVIGKDNTILRHGIHGLYWLYSIDI
PATLLVEGNNTLFLTQPISDSPLPAFHGLMYDYIRLEGPPSSTSTRGVKPANIAPNTSLD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcaaagggtgcaaatggatattcaggaccgtcatgtagttatggataatggc
atactccaagttaccttgtcaaaaccagatggaattgttaccagaatacaatataatggc
atcgacaatttgcttgaagttcttagtgacgaagttgacagagggtattgggaccttgta
tggagtgaagctggaagtgtgggcacaacgggaacgtttgatgtgattaagggtacaaaa
ttcgaggttatagtggaaagcgatgaacaagtagaggtctcgttcacaagaaagtggaat
ccctcccaaaagggcaagcttgtccctttaaacatagacaaaaggtttattatgcttcgt
aattcgtcaggcttctactcctacgccatctatgatcacttaaaagaatggcctcctttc
aaccttccccagaccagaattgtgttcaagctcagaaaagaaaagtttcaatacatggcc
atagcagataacaggcaaagatacatgccccttcctgatgaccgatcgcaggagagaagt
aaagtcttagacgtacctgaggcagtccttcttgtcaatccgatagagccagaattcaag
ggagaggtggatgacaaatacgagtactcaagcgagaaccaaaacctgcggatccacggt
tggatttgtatggacccgcctgtggggttctggcaaataactcccagtgatgagttccga
tctggtggacccctcaaacagaatctcacctcccatgttggcccctattgtcttgctatg
tttcttagtgctcactattcgggagaggacttggtgctgaagctgaaaccagatgagcca
tggaagaaagtctttggccctgtttttatctatcttaattctgctacgtccaatgcaaat
gatgatccatcaccactctgggaggatgcaaaacaccagatgatgacagaagtgcaaaaa
tggccttacgatttccctgcttccagtgagtttccaccgtcggatcaacggggtaatgtt
agtggtagaatacaggttcgagataggtacgttagtgaagattgcattccgggaaagggt
gcttatgtaggcttggcaccaccaggagatgctggatcctttcaaagagattgcaagggc
taccagttctggactagggcagatgagcatggctattactctataaagaatatacgtgag
ggccaatataatctttatgcatgggttcctggtttcattggagattatcgatatgatgca
gccattaacataaccgcaggttgtgatagtgatgtgggtgagcttgtatatgaacctcca
agagatggaccaacattgtgggaaattggcatccctgatcgttctgcagctgaattctat
gtccctgatcctaatccaaactatatcaataaactttatgttaaccatcctgacaggttt
aggcagtatgggttatgggaaagatatgcagatttatatcctgatcaagacttaatttac
actgttggcaccagtgactatgctaaagattggttcttcgctcaggttaccaggaagaaa
gatgatgacacatatgaaggcactacttggcagatcaagtttcaactagacaatgtcaat
aagagtggaaccttcaaacttcgaatctccctcgctacggcgaatatcgcagaattacag
attcggataaatgacccgaaagcagaccctcctctgtttacaacaggagtgattggaaag
gacaacacaattctaaggcatggaattcatggcctctactggctgtatagcatagacata
ccagccacattgcttgtggaaggaaacaatacactgtttctaacacaaccaattagcgac
agccctttgcccgctttccatggactcatgtatgactatattcgtttagaaggtccacca
tcttctacttccactagaggtgtcaaaccggccaatatagcaccaaacacatcactggat
tag
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