Prunus avium (sweet cherry): 110772350
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Entry
110772350 CDS
T05161
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110772350
Enzymes [BR:
pavi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110772350
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
110772350
NCBI-ProteinID:
XP_021832475
UniProt:
A0A6P5TZS0
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MAFNLRQWRWVLGAFAMVALFSLFRDDQGFTRIPPVVRRELRSVSGRDNTYNQMLSKTDN
QVVLNNGLVQLTFSYPGGDVIGIKYKGIDNLLEIKNQPSNRGYWDLVWNKPGGKDSVDKL
QGTRFKVITATADQIEISFTKTYSPSLGNDTVPLNVDKRYIMQRGRSGFYAYAIFERLEG
WPEVDMDQIRIVYKLQQDKFRYMAISDDRKRVMPTADDRANGEPLAYPEAVLLTNPSNPD
FRGEVDDKYQYSSEDKDNNVHGWICEDPAVGFWIITPSDEFRTAGPFKQDLTSHVGPTAL
SMFVSTHYAGKEVGMTFKDGEAWKKVFGPVFIHLNSAPSSNEYLTLWENAKEQLAEEVQR
WPYNFTQSEDFLSSDQRGSVAGQLLVRDRYRNKRLIWASSAYVGLAAPGNAGSWQKESKG
YQFWTQTNKQGYFLIKDVRPGNYSLYATVPGFIGDYKYEANITIEPGSEIKLADLTYEPP
RNGPTLWEIGIPDRSAAEFNIPDPSPTLMNQLYTNHTDKFRQYGLWERYSDLYPNHDLIY
TVGTDNYRDDWFFAHVTRNTGNQTYEPTTWQIQFQHNKGANPGNYTLQLALASATNAEVQ
VRVNDWSANPPHFTTGLIGKDNAIARHGIHGLYWLFSVGLPSDRLQEGKNTIYLTQSRHK
TTLDGVMYDYLRLEGPPQE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcatttaacctaaggcaatggcgctgggttcttggggcattcgcaatggttgccttg
ttttccttgttccgtgacgatcagggtttcacgaggatccccccagtagtaagaagagaa
ctaaggagcgtttctggacgagataatacgtacaatcagatgctatcgaagactgataat
caggtggtgctgaataatggcctggtccaactcactttctcttatcctggaggagacgtc
attggaatcaagtacaagggaattgataacttgcttgaaatcaagaaccagccaagcaat
agggggtactgggatcttgtctggaacaagccgggaggaaaagatagtgtggacaagcta
caaggaacaagatttaaagttattacagcgacggcagaccaaatagaaatttcttttact
aaaacctacagtccttccctcggtaacgacacagttcccttgaatgttgacaaaaggtac
ataatgcagcgcggtcgctctgggttctatgcctacgccattttcgagcgcctcgaaggg
tggccggaggtggatatggatcaaattagaattgtttacaagcttcaacaagacaaattt
cggtacatggctatatctgacgacaggaaaagggtcatgccaacagccgatgaccgtgca
aatggtgagccccttgcctatcccgaagctgttcttttaaccaatccgagcaatcctgac
tttagaggagaggtggatgacaaataccaatactcaagtgaggacaaagataacaacgtc
catggttggatttgtgaagacccagctgtgggcttctggatcatcacacccagtgatgag
ttccgtaccgctgggcccttcaagcaggaccttacctcccatgtgggcccaactgccctc
tctatgtttgttagtacccattatgctgggaaggaagttggaatgacatttaaagatggt
gaggcatggaagaaggtttttgggccagtctttatccatctcaattcagctccaagctca
aatgaatatctcacactctgggaaaatgctaaagagcagttggctgaagaagtgcaaaga
tggccatacaatttcactcaatcagaagactttctcagctctgatcagcgtggatccgtt
gccggtcaattactagttcgggatcggtacaggaataagaggcttatttgggcaagctcc
gcttatgtgggattggctgcacctggaaatgcaggatcatggcaaaaggaaagcaagggt
tatcagttctggactcaaaccaacaagcaaggttatttcctcattaaagatgttcgacct
gggaactatagcttgtatgcaactgttcccggctttattggggattacaaatatgaggct
aatattacaattgaaccaggaagtgaaattaaattggctgatcttacttacgaacctcca
agaaatggccccaccctgtgggaaatcggcatcccggatcgatcagctgctgagttcaac
ataccagatccgtctccgacccttatgaaccaattgtacaccaatcacacagacaagttt
aggcaatacggcttgtgggaacgatactcagatttataccctaaccatgatctcatctac
accgttggtactgacaattaccgtgatgattggttcttcgctcatgtgaccaggaacaca
ggaaatcaaacgtatgaaccaaccacatggcaaattcaatttcaacataataagggggca
aatcccggaaattatacactgcaattggcattggcctcagccactaatgcagaagtgcag
gtccgggttaatgattggagcgcaaacccacctcatttcacgacagggctaatcgggaag
gacaatgccatagcaagacatggaattcatggtttgtactggttgttcagtgttggtcta
ccaagcgatcggctacaagaaggaaaaaacaccatctatcttactcagtcaagacacaag
acaactttagacggcgtcatgtatgactatctgcgattagaaggaccacctcaagagtga
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