Prunus avium (sweet cherry): 110772443
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Entry
110772443 CDS
T05161
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110772443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110772443
03036 Chromosome and associated proteins [BR:
pavi03036
]
110772443
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110772443
Coactivators
SAGA/TFTC/STAGA complex
110772443
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110772443
STAGA complex
110772443
TFTC complex
110772443
SAGA complex
110772443
SLIK complex
110772443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
110772443
NCBI-ProteinID:
XP_021832575
UniProt:
A0A6P5U066
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MFFPCLKFSFPSERTKRASIVLTPSILVCICHFQEKLLGRRSGGASRMSIVPKENVEVIA
QSIGINNLSPDVALALAPDIEYRLREVMQEAIKCMRHSRRTRLTADDVDGALNLRNVEPI
YGYVSGGPLRFKRAIGHRDLFYIDDKDVEFKDVIEAPLPKAPLDTGIVCHWLAIEGVQPA
IPENAPVEVLAAPSDGKKYEQKDDGIPVDIKLPVKHILSRELQLYFDKITELVVSRSNLV
IFKEALVSLATDSGLHPLVPYFTCFIADEVSRGLNDYPLLFALMRVVRSLLQNPHMHIEP
YLHQLMPSVVTCLVAKRLGNRFADNHWELRDFTANLVASICKRFGHVYNTLQSRLTKTLV
NAFLDPKRTLTQHYGAIQGLAALGPSVVRLLVLPNLESYLRLLERELLLDKQKNEMKRHE
AWRVYGALLNAAGQCIYDRLKMFPLLPSPAPLSFWRNSQRVITMPNKRKGSVEHMEEQPP
LKKIATDGPTGLVPTNSSPSHMEVETATPAPSGDTDAGPPSSSGQMPNESVSNSRSRRDR
AAGRSLKKSALLTQVWKDDLNSGHLLVSLFELFGEDILSFVPAPEMCLFL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgttttttccctgtctgaaattctcttttccgagtgaacgaacgaagcgcgcaagcatt
gtgctcactccgagcatacttgtctgtatttgccatttccaagagaaattgttgggacgg
aggtcaggaggtgcgtcgagaatgagcattgtgcctaaagagaatgttgaagtaattgca
caaagcattgggatcaacaacttgtctccagatgtcgctctcgctctcgctcccgatatc
gaatatcgcctgcgtgaggttatgcaggaggctattaaatgcatgcgtcactcgaggaga
actagattgacagctgatgatgttgatggcgcactcaacttaagaaacgttgagccaata
tatggttatgtttctggcggtcctttgcggttcaaaagagctattggacatagggacttg
ttttacatcgacgacaaggatgttgaatttaaagatgtgattgaagctcctttaccaaaa
gcgccacttgatactggaattgtttgtcactggctagctatagaaggtgtacaacctgca
attccagaaaatgctcctgtagaagtacttgcagctccttctgatggtaaaaagtatgaa
cagaaggatgatggaattcccgttgacattaaattaccagttaagcacatattgtctagg
gaacttcagctatattttgacaaaatcactgagcttgtagtgagtaggtccaatttggtt
atttttaaagaagcattagtgagtttggccactgattcgggacttcatccattagttcct
tatttcacatgctttatagctgatgaggtttctcgtggtttgaatgattatccacttcta
tttgctttaatgcgagttgttcggagtcttctccagaatcctcacatgcacatagaacct
tatctacaccaattgatgccatctgtggtgacttgccttgttgcaaaaaggttaggcaat
aggtttgctgacaaccattgggaacttagagacttcactgcgaacctggttgcttcaatc
tgcaaaaggtttgggcatgtctataacactctgcagtcccgtcttacaaaaactttggtc
aatgcatttttggacccaaagcggacattgactcaacactatggtgcaattcaaggttta
gctgctctaggccccagtgtggttcgccttcttgtgctgccaaatctggagtcatatctg
cgacttcttgaacgagagctgcttcttgacaagcaaaagaatgagatgaagaggcatgaa
gcttggcgtgtttatggagccttgttgaatgcagcaggtcaatgcatatatgataggctc
aagatgttcccacttttgccatctccagcacccctatctttctggaggaacagtcaaaga
gtcattactatgccaaataaacgcaagggaagtgtggagcacatggaagagcaaccaccc
ctgaagaaaattgcaactgacgggcctacaggattagtgccaactaattcttcaccgtct
cacatggaagtagaaacagcaactccagctccttcaggggatactgatgcagggccccca
tcatcttctgggcagatgcctaatgagagcgtttcaaacagcagaagtagaagggacagg
gctgctggtcggtcactaaagaaatcagctctgctcactcaggtttggaaggatgactta
aattctggccatctcctggtatcgttgtttgagttgttcggtgaagacattctctccttc
gttccagctcccgagatgtgtttgtttttgtaa
DBGET
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