Prunus avium (sweet cherry): 110772544
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Entry
110772544 CDS
T05161
Name
(RefSeq) protein CHROMATIN REMODELING 25 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110772544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110772544
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
110772544
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-GeneID:
110772544
NCBI-ProteinID:
XP_021832673
UniProt:
A0A6P5TY04
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MEDEYEVLSESDISDASDSSDEYAADQEELELEREESDDVLGNNRKSIDPPQPSGEDQKS
KNVDALVRGNLVVKRQSLLPRVLSVTEGATVCRKPFKPPCSNGYDDGNDQLARRLYARKR
FVPWGSSSTAFVPNIDRILNIPNEAEKDIVEESVTLPPGIDPLVLWQPEEFEDGAANMMQ
IVVDPVLVRFLRPHQREGVQFMFECVSGLNSAANIHGCILADDMGLGKTLQSITLLYTLL
CQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVHLIALCESTRDDVVSGIDRFTGP
RSPIQQVLIISYETFRMHSTKFSQSESCDLLICDEAHRLKNDQTMTNQALAALSCKRRIL
LSGTPMQNDLEEFFAMVNFTNPGILGDAAHFRRYYEAPIICGREPNASEEEKKLGGERSA
ELSGKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQLDLYTHFIHSKNVKRAISEETK
KSKILAYITALKKLCNHPKLIYDTIKSGSPGTSGFEDCIRFFPPEMFSGRSGSWTGGDGA
WVELSGKMHVLARLLAHLRKRTDDRIVLVSNYTQTLDLFVQLCRERRYPYLRLDGTTSIS
KRQKLVNQFNNPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD
GQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSMAQGNLLSTEDLRDLFT
FHENVRSEVHEKMNCIRCQNSNDTHRSIAEGDANQPTNESGQSGHEISDIGGFAEMAGCL
HELKSSEKQVGTPLEEDLSNWGHHFFPTSVPDAILQASAGEEVTFVFTNQVDGKLVPVES
KVNPKMQGEEGKENHPKFRQNLNQKPLLLSWQRKPLESVCSSENSTRSTMSAPSKPSEKT
TVESVKTSLKGSVHVALKPKLSLKIRLPLKRSSPDTVNHDDDFV
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaatacgaagttctctcagaatccgacatctcagatgcgtccgattccagc
gatgaatacgcggccgaccaagaagagctagagctagagcgagaagaaagtgacgacgtc
ttggggaacaatcgaaaatccatagaccctcctcagccctccggcgaggatcagaaatcg
aagaatgtcgacgctctcgtcagaggtaaccttgtcgtgaaaagacagtcactgcttcca
cgagttctctcagtgacagaaggagcaacagtttgtaggaaaccctttaaaccaccatgc
tctaatggctatgatgacggaaatgaccagcttgctcgtcgtctctatgcacgtaaacga
tttgttccctggggctcatcaagtacagcattcgttccaaacattgataggattttgaat
ataccaaacgaggctgagaaagatatagtggaagagagtgtgactctgccacccggaatt
gatcctttggtcttgtggcaacctgaagaatttgaggatggggctgctaatatgatgcag
atagtagtggacccagtgcttgttcgtttccttcgaccacatcaaagagaaggcgttcag
tttatgtttgaatgtgtttcagggttaaatagtgctgcaaacatacatggatgcattctg
gcagacgatatgggtttgggaaagacattgcagtcaatcacattactatatactcttctt
tgtcaagggtttgatgggaaaccaatggttaaaaaagcaattatagtcacccctaccagt
cttgtgagcaattgggaggctgaaataaagaagtgggttggagaaagagttcatctcatt
gctctctgtgaaagtacccgagatgatgttgtttctggaattgatcggttcacaggtcct
cgcagccctatacagcaggtactaattatttcatatgagacattccggatgcattcaaca
aagtttagccaaagtgaatcctgtgaccttctcatatgtgatgaggctcacaggctgaag
aatgaccagacaatgacgaatcaggcgttggccgctctttcatgcaagaggcgcattttg
ttgtcaggaactccaatgcagaatgacctagaagagttctttgccatggtcaactttact
aatcccggcatcttaggggatgctgcacattttcgtcgctactatgaggcacctattatt
tgtggaagagaacctaatgcctctgaagaagagaagaagctaggtggtgagcgctctgct
gaactaagtggaaaagttaatcagtttatattgcggaggactaacgcactattatcaaat
catctgccaccaaagataattgaagttgtttgttgcaagttgactcctctccaattagac
ctatatacccattttatacattccaaaaatgttaaaagagcaatctctgaagagacaaag
aaatcaaagattttggcttatataacagctcttaagaagctatgcaatcatccaaagctc
atctatgacaccataaaaagtggaagtccaggaacttcaggttttgaggactgtattcgc
tttttcccaccagagatgttctctggaagatctggatcatggactggcggggatggggct
tgggttgaactatctggaaaaatgcacgttttagctcgattactggcccatctacgtaag
aggactgatgaccgtattgtccttgtctcaaactatacacagacgctggacctttttgtg
caactgtgtcgagaaagacgatacccatatttgaggcttgatggaaccacatctatcagt
aaaagacagaaattagtgaaccagttcaataacccatcaaaggatgaatttgtatttctc
ttaagcagcaaggctggtggttgcggtctcaatttgataggtggaaatcgactagtcctg
tttgatcctgattggaatcctgccaatgataaacaagctgctgcaagagtttggagggat
gggcaaaagaagagagtatacatttacagatttttaagtactggaacaattgaagaaaag
gtgtaccagcgtcaaatgtcaaaggaagggcttcaaaaagttattcagcaggaacaaaca
gatagctcaatggcacagggaaaccttctttcaacggaagacctacgcgatcttttcaca
tttcatgagaatgtgaggtctgaagtgcatgagaagatgaactgcattcgttgccaaaat
agcaatgatacacatcgaagcatagcagagggagatgcaaaccaaccaactaacgaaagt
ggtcagtctggccacgaaatctctgacataggtggatttgcagaaatggctggatgctta
catgagttaaagagctcggagaagcaggtagggacacctctagaagaggatttaagtaat
tgggggcatcatttcttcccaacttcagtacccgatgctattctccaagcttcagctgga
gaagaggtcacatttgtttttacaaaccaagtggatgggaagcttgtacctgttgaatca
aaggtaaacccaaagatgcagggagaagaaggaaaagagaatcatcccaaatttagacaa
aacctgaatcagaaacccttgctattgtcttggcaaagaaaaccgctagaatctgtttgt
tcgagtgaaaattctaccagaagcacaatgtctgccccttccaagccctcagaaaagacc
actgtggaatcagtgaaaacttctttgaagggctcggtgcatgtagcattaaagcctaag
ctctctcttaaaattcgattgcccctgaaaagatcgtctcctgataccgtcaatcacgat
gatgattttgtgtaa
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