KEGG   Prunus avium (sweet cherry): 110772670
Entry
110772670         CDS       T05161                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03030  DNA replication
pavi03410  Base excision repair
pavi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110772670
   03410 Base excision repair
    110772670
   03420 Nucleotide excision repair
    110772670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pavi03032]
    110772670
   03400 DNA repair and recombination proteins [BR:pavi03400]
    110772670
Enzymes [BR:pavi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     110772670
DNA replication proteins [BR:pavi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    110772670
DNA repair and recombination proteins [BR:pavi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      110772670
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 110772670
NCBI-ProteinID: XP_021832845
UniProt: A0A6P5U0Y1
LinkDB
Position
Unknown
AA seq 2219 aa
MSGFQSRKRDRGSSWSSKKQKVMRSAEEELESKLGFDLFSEGDKRLGWLLTFASSSWEDQ
DTRKVYSCVDLYFVSQDGSAFKSKYKFRPYFYAASKEKMEMDVEAYLRRRYENQIADIEI
VEKEDLDLKNHLSGLRKSYLKLSFDNVQHLMNVKSDLLHVVERNHAKFDAADAYESIVIG
KREQRPQDFLDCIIDLREFDVPYHVRFAIDNDVRCGQWYDVSVSSTGVMLEMRTDLLQRA
EVHVCAFDIETTKLPLKFPDAEYDLIMMISYMVDGQGYLIINRECVGDDIEDLEYTPKPE
FEGFFKVTNVKNEVELLRQWFAHMREVKPGIYVTYNGDYFDWPFLETRAAYHGLKMSDEV
GFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYHPLEVNPEDMVR
FAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM
VQAYKANVICPNKHQSDPEKFYKNHLLESETYIGGHVECLESGVFRSDLPTSFKLDASAY
EQLINNLDRDLQYAIRVEGKMDLESVSNYEEVKSSILEKLVRLRDEPIREESPLIYHLDV
AAMYPNIILTNRLQPSSIVTDEICTACDFNRPGKTCLRKLEWVWRGEIFMAKKSDYYHLK
KQIESEFVDGANSKLSKSFLELPKMEQQSRLKERLKKYCQKAYRRVVDKPIAELREAGIC
MRENSVYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCA
LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLTDPIGNTYTTHSECS
IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE
LFDKFLHGSTLEECYSAVASVANRWLDLLDNQGKDVADSELLEYISESSTMSKSLADYGE
QKSCAVTTARRLANFLGDSMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKF
YVRKWCKVSSDVGIRSIIDWSYYKQRLGSAIQKIVTIPAAMQKVANPVPRVAHPDWLHKK
VREKDDKFRQRKLVDMFRSLNRDHLLEKNSDAIGSNHAIDEEIVEDLEDFNRKGSSINGP
RPIVRCYEVNNKKNSVETAGQIDSQQQRTNNKENELQEQNAVSSEAIDRNVDYHGWLQIK
KRKWKDTLDKRKKQRLNNARSAHHANNEVLGGGRNRKEPQGKGVNSYFRRNEEALTRCHW
QILQLVPSSQGDQFSAWVVVEGIMLKIPVTVPRVFYINSKAPIEKLFEKISEEKPQGKNV
NKTLPHGRRAYNLYEAIIDEGRFKTISKKLAALLGDPEVEGIYETKVPLEFNAIVQIGCV
CKVDKTAKKRNVQDGWSVSELHMKTTTECTYLDESISFFYLYQSTSEGRAIFIAYFPASR
TITIVVVNPYQNKDLSASFLEKQFREACQALSIQPPPRNGISIKVEYVGFPKDAEMILHR
AINEHRHEHHGPTVAVIECPNFQLMKLSIGALDDFPCVSIPSNARDSNYQVLGWQQVAAK
IGMQRCAASPQWLRERISLSRYAHVPLGNFELDWLIHAADTFFSRALRDQQQVLWISDDG
IPDLGGINEEDTCFADEVYQHDFSFPGAYRKVTVELKIHHLAVNALLKSNQVNEMEGGAL
LGFESDVNSGVHTSDLHVGFDEATSCAPTLRVLKQLIQRCLANAVTSGNVYADALLQHLY
RWLCSPQSKLHDPALHRILHKVMSKVLAILMIEFRKLGAKIIFANFYKIIIDTGKFDLSG
AKAYCDSLLKTLQARELFEWIELEPLQFWHSLLFMDQYNYGGIPARADGSMHGEAQMDIV
SSWNIAEYLPKKIQDHFVYIVSQFLYIPWDYEQKQAAVRTSLQNDSNCTPSITVAAAETF
ESHMIDFLKGQISSYFTDKLLGIVHDTILHMKELNKSVDGHHTSPGLPQLAGDIHKGDAA
LEFIKHVCGVFSLDQNVHHDVMVMRRNLLKYLRVREFAPEAEFRDPCAFFTLPNVICSYC
NDCRDLDVCRDSALLAGEWRCVVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCLRC
KQVKAAHLADQCVCAGSYKCREDAMKFRSKMELIWKIAIHQKFQLLQECTEWILEVDHS
NT seq 6660 nt   +upstreamnt  +downstreamnt
atgagcggcttccagagccgaaaacgggaccgtggaagctcatggagctccaagaagcag
aaggttatgcgcagcgccgaggaagagcttgagtcgaagctagggttcgatctgttctca
gaaggcgataagcggctcggatggctgctcactttcgcatcctcatcttgggaggatcaa
gacacccgtaaggtttatagttgcgtcgatttgtatttcgtttcgcaggacggttctgct
ttcaagtcaaaatacaagttccgcccttatttctatgcagcctcaaaggagaaaatggaa
atggatgttgaagcatatttgagaagacggtatgaaaatcaaattgctgatattgaaata
gtggagaaagaagaccttgatctgaaaaaccatttgtctggcctacgcaagtcctaccta
aagctatcatttgataatgttcaacacctaatgaatgtcaagagtgacctattacacgtt
gtcgaaagaaaccatgccaaatttgatgctgcagatgcttacgagtcaatagtaatagga
aaacgagaacaaaggcctcaggattttctagattgtattattgatcttcgtgaatttgat
gttccctaccatgtccgctttgccattgacaatgatgtaagatgtggccagtggtatgat
gttagtgtatccagtactggtgttatgcttgagatgaggacagatcttctgcagcgagct
gaagttcatgtttgtgcatttgatattgagacgactaagctacctttgaaatttccagat
gctgaatatgatttaataatgatgatttcgtacatggttgatggacaaggttacctgatt
attaacagagagtgtgttggggatgatatagaggatctggagtacactccaaaaccagaa
tttgaagggtttttcaaggtgacaaatgtgaagaatgaggtagagcttctaagacagtgg
tttgctcatatgcgggaggtgaagcctggaatttatgtcacatacaatggtgattatttc
gactggcctttcctggaaaccagagctgcatatcatgggttaaaaatgagtgatgaggtt
ggatttcaatgtgacaagaaccagggggaatgccgggctaaatttgcttgccatcttgat
tgttttgcttgggtcaaacgtgatagttatcttcctcaagggagccagggccttaaggct
gttacaaaggcaaagttaggttatcatcccctggaggtgaatccggaggatatggttcgc
tttgcgaaggaaaaacctcagatgatggcatcgtattctgtctctgatgccgttgcaact
tattacttgtacatgacctatgttcatccattcattttctctcttgcaactattattcca
atgtctccggatgaggttttgcgcaagggtagtggaaccctttgtgaaatgcttctcatg
gtccaggcatacaaggcaaatgttatctgccctaacaaacaccaatctgaccccgaaaag
ttctataaaaatcaccttttagagagtgagacttatataggtggccatgttgaatgcctt
gaaagtggtgtgtttagatctgatcttccaaccagttttaagcttgatgcctctgcctat
gagcaattgatcaacaaccttgatcgagatcttcaatatgctataagagtagagggtaag
atggacttggaatccgtgtccaattatgaagaagtgaagagttctatattggaaaagctt
gtgaggctgcgagatgaacctatacgggaagaaagcccccttatttatcatctggatgtt
gctgcaatgtatcccaacattattttaacaaataggcttcagccatcctcaatagttaca
gatgagatctgcactgcttgtgatttcaaccgtccaggaaaaacttgtcttcgcaagctt
gaatgggtttggcgtggagaaatattcatggcaaagaaaagtgactattatcatttgaag
aagcaaattgagtctgagtttgttgatggtgccaattccaagctgtcaaaatcttttctt
gagttgcctaaaatggagcagcaatcaaggctcaaagagcgtctaaaaaaatactgtcag
aaggcatatagacgagtagtggacaagccaattgctgaacttcgggaagcagggatttgc
atgagggaaaattcagtctatgttgacaccgttcgcagctttcgagatagaaggtatgag
tacaaagggcttaataaggtatggaaggggaagttgtctgaagccaaggctagtgggaat
tctataaaaatccaggaagcacaagatatggtagtgctttacgattcattacaacttgca
cataagtgtatacttaattccttttatggatatgtcatgcgcaagggtgcaaggtggtat
tcaatggaaatggctggagtagttacatatactggagctaaaattattcagaatgctcgc
ttgttggttgagaaaattggaaaacctcttgaattagacacagatggtatctggtgtgca
ctccctggatcttttccggagaactttacattcaaaacaaaagacttgaagaagaagctg
actatctcatatccatgtgttatgcttaacgttgatgtagcaaggaacaatacaaatgat
caataccagactcttacagatcctattggaaatacttacacaactcatagtgaatgttct
attgaatttgaagtggatggaccctacaaggcaatgattcttccggcttctaaagaagaa
ggaattttaattaagaagcgatatgctgttttcaatgatgatgggacccttgctgaactt
aaaggtttcgagatcaagcgtagaggtgagctgaagctcatcaaagttttccaggccgag
ctttttgataagttccttcacggttctactttagaggaatgctattcagcagtcgcttct
gtcgccaatcgctggcttgatctccttgataatcaaggaaaggatgttgcagacagtgag
ttgcttgaatatatatcagagtcaagcacaatgagcaagtctttagcagactatggagag
caaaagtcatgcgcagtgaccactgcaagacgtcttgctaattttctcggtgattcgatg
gtcaaagataaaggactgcgttgccagtatatagttgcatgtgaaccaaagggcacacct
gtaagtgagcgtgctgttccagttgcaatatttgaaacagatgcggaaatcatgaagttt
tatgtacggaagtggtgcaaggtttcatcagatgtcggcattcgatccattattgactgg
tcctattacaagcaacgtcttggttcagcaattcagaaaattgtcaccattccggctgca
atgcaaaaggtcgcaaatcctgttcctagggtagctcatcctgattggctgcataagaag
gttcgtgagaaggatgacaaatttcgacagcgaaaattggttgatatgttcaggtcattg
aacagggatcatttgctggaaaagaacagtgatgctatcggctctaatcatgcgattgat
gaagagattgttgaagatttggaagacttcaacagaaaaggcagttccataaatggaccc
agaccaattgtccgatgttatgaagttaataacaagaaaaattcagtcgagacagcaggt
caaatagattcacagcaacaacgaactaataataaagaaaatgagcttcaagagcaaaat
gccgtctcttctgaagctattgatagaaatgtagattatcatggctggcttcaaataaag
aagaggaaatggaaagatactcttgacaagaggaagaagcaaagattgaataatgcaagg
tctgcgcaccatgctaataatgaggtgcttggtggtggtagaaatcgtaaagaaccacag
gggaaaggcgttaattcttattttaggaggaatgaagaagccctaacacgctgtcactgg
cagatattacaactagttcccagttctcagggtgaccaattttctgcgtgggttgttgtc
gaaggaatcatgcttaagattcctgttactgttccaagagttttttacatcaattctaaa
gcacctatagaaaaactatttgaaaaaatttctgaagaaaaacctcaaggaaagaatgtc
aacaagactcttcctcatggaaggcgtgcctacaacctgtatgaggctataattgatgag
ggtcggtttaaaacaataagcaaaaaacttgcagctcttcttggcgatccagaagttgag
ggaatatatgaaacaaaggtgcctttggagttcaatgcaattgttcagattggttgtgtc
tgtaaagtggataaaactgctaagaagagaaacgtccaggatggttggagtgtgagtgaa
ctgcacatgaagacaactactgagtgcacatatctggatgaatcgatctctttcttttac
ttgtaccagagcacatctgaagggcgagctatatttattgcctattttcctgcgtcaaga
acaataactattgtggtggtaaatccttatcaaaataaagatttgtcagcatcttttctt
gagaaacaatttcgtgaagcttgccaagcattatcaattcagccacccccgaggaatggt
atcagtattaaggttgagtatgttggatttcccaaggatgctgaaatgattttgcaccgt
gcaattaatgagcacagacatgaacatcatggacctacagttgctgttattgaatgccca
aattttcagttgatgaagttgagtataggagctcttgatgactttccttgtgtgagcatt
ccctctaatgctcgtgatagtaactatcaggttcttggttggcaacaagtggcagcaaaa
attggaatgcaacgttgtgctgcatcacctcagtggttgagggagagaatttccctctca
agatatgcccatgtaccattgggtaattttgaacttgactggcttatacatgcagcagat
accttcttttcaagagcactacgggatcagcaacaggtgctttggatatctgatgatggt
attccagatctaggaggcattaatgaagaagatacatgttttgccgatgaggtctatcaa
catgacttttctttcccgggagcatataggaaggtcactgtggagctaaagatacatcat
ctggctgtaaatgctcttctgaaaagcaaccaggtgaatgaaatggaaggaggtgctttg
ctaggatttgaatcagatgtgaactcaggagtacatacgtctgatctacatgttggcttt
gatgaagctacctcatgtgcacctaccctccgtgtcttgaaacagttgatccagaggtgt
cttgcaaatgcagtaacatctggaaatgtgtatgctgatgcactattgcagcatctatat
cgatggctttgcagcccccagtctaaacttcatgatccagctcttcaccgcatactccac
aaggtcatgtcaaaggtgcttgcaattttaatgatcgagttccgcaaattgggtgccaag
attatatttgcgaatttctacaagattattatagacacaggaaagtttgatctgtcagga
gccaaagcttattgtgatagcttgcttaaaacactgcaagcaagagaactatttgagtgg
attgagcttgaaccattgcaattctggcattctctgcttttcatggatcagtataactat
ggtggaattccggcaagagctgatggaagcatgcatggtgaagctcaaatggatattgta
tcaagctggaatatcgctgaatacttacccaagaaaattcaggaccattttgtttatatt
gtctctcagtttctatatattccctgggattatgaacagaagcaggcagcagttagaaca
tctttacagaatgacagcaattgcacgccatcaatcactgttgcagctgctgagactttt
gagtctcatatgatagattttcttaaaggacagatcagctcatactttacagataaactt
ctgggaattgttcatgataccatacttcacatgaaggagctgaacaaatctgtggatggc
catcacacatctcctgggctgccacaactcgctggtgatatccacaaaggggatgccgcg
ctggagttcattaagcatgtctgcggtgttttctcccttgaccaaaatgttcaccatgac
gttatggtaatgagaaggaatctgttgaaatatttgcgtgtgagggagtttgcacctgaa
gccgagtttcgtgatccctgtgcattcttcaccttaccaaatgtcatttgcagctactgc
aacgattgtagagacctggacgtgtgccgtgactcagctctattagctggggagtggcgc
tgtgttgtgccacaatgcgggcagccttatgacagagaggtaatggagaatgcccttctt
cagattgtacggcagagagagcgcctctaccatctacaggatctggtatgccttaggtgt
aagcaagtgaaagctgcacacttagcggatcaatgtgtatgtgctggctcatataaatgc
agggaggatgcaatgaaattccgtagcaagatggagttaatttggaagattgccattcat
cagaaattccaacttctccaagagtgcactgaatggattttagaagttgatcactcttaa

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