Prunus avium (sweet cherry): 110773262
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Entry
110773262 CDS
T05161
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110773262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110773262
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110773262
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_2
TPR_12
Motif
Other DBs
NCBI-GeneID:
110773262
NCBI-ProteinID:
XP_021833463
UniProt:
A0A6P5U098
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MATDQNMSSWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLETLSKKLKAKTLRTETPQQS
IAATRLLAREGLNAEQLARDLKSFELKTTFEDVFPSEATTVEEYLQQHFYPCLRLTDDYM
LKVLEEDWQKEKRDFLQSLSQISTLPRTNMTYTSSAGSRSGQIASITSSPQVSSTPSSME
LVPLASKPILEKKTSVYAEVVKNLNNARQRGLPFKPASAFKGAYESLGLDASGGKSVNMQ
KIWHLLQTLMGEDITIQRGASKRMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVG
NLQRIRAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRTGYYDEARAVALSSRV
SNQFAPLLTEWINTGGMVPAEIAAAASEECEKMLRTGDRVGRAAYDKKKLLLYALISGSR
RQIDRLLRDLPTLFNTIEDFLWFKLSAVRDCPGGAAPIVMNESLVPYTLDDLQIYLNKFD
PSYYTKNGKDPLVYPYVLLLSIQLIPGVVYLSKETGDEGYNIDAAHISIVLADHGVLSEG
AGAGQKMGVMDAYAEASSIIRQYGSVYLRLGNLQVALEYYAQAAAAVGGGQLSWSGRGNV
DQQRQRNLMLKQLLTELLLRDGGIYLLLGSRGAGEEGELGRFLTDAKERQQFLLEAAHQC
QEAGLYEKSIEIQKRIGAFSMALDTINKCLSEAICALSRGRLDGESRTAGLIHSGNEILE
MHKYYPEISPQERESVSEQHIVLRQLEAVLSIHKLARGGHYADALREVARLPFLPLDPRT
PDATTDVFQNLSPHVQACVPDLLKVALTCLDNMVDSDGSLRALRAKIASFIANNSSRNWP
RDLYEKVARSF
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgaccaaaacatgagcagctggaccgatctgctccactcctccaccaagctt
ctcgaacaagccgctccttccgcgcagttccctcctctacagagaaatttggatcagtta
gaaacattatcgaagaaactcaaggcgaaaactctacgaactgagactcctcaacaatcc
attgctgccacgaggcttcttgcacgtgagggactaaatgcggagcagcttgcacgtgac
cttaagtcctttgaattgaagacaacatttgaggatgtttttccgtctgaagcaacaact
gtcgaagagtatctgcagcagcatttttatccttgcttgcgtctcacggatgattacatg
ttaaaagttttggaggaggattggcagaaagaaaaacgtgatttccttcaaagtctaagt
cagatttcaacattacccaggactaacatgacttatactagcagcgctggtagtcgttct
ggtcaaatagcgtccataacttctagccctcaagtttcatctactccatctagtatggag
cttgtacctttagctagcaagcccatccttgagaagaaaacatctgtctatgcagaagtt
gttaaaaatctgaataatgcaaggcagcgtggattaccgtttaaacctgcttcagctttc
aagggtgcttatgagagtttaggccttgatgcatctggtggaaaatcagttaacatgcag
aagatatggcaccttcttcagacattaatgggcgaagatataaccatacaacggggtgct
tcgaaacggatgtcattagttattggggcaaggcgccacctggaatgggggcatgaaaag
tacatcatggatacaatccaaagtcatcctgcacaggcagcccttggaggagttgttgga
aatttacaaagaattcgtgcctttcttcggattcgtttaagagattatggagttctagat
tttgatgcaggcgatgctcgtaggcagcctcctgttgataccacttggcagcagatctac
ttttgcttgagaactgggtattatgatgaagcaagagctgttgctttgtcatctcgcgtg
tcaaaccagtttgctcctctgcttactgagtggattaatactggaggtatggtgcctgcg
gagattgcagctgctgcatcagaagaatgtgaaaaaatgttaagaacaggtgatcgtgtg
ggccgagctgcatatgacaagaaaaagttgttactatatgctctcatatctggttctcgt
aggcaaatcgaccgcctactaagagatctacctactctttttaacaccatagaggatttc
ttgtggttcaaattgtcagctgtaagagactgccctggtggagctgcacccattgtcatg
aatgagagcttggtaccatacacattggatgatttgcagatttacttgaataaatttgac
ccctcatactatacaaaaaatggaaaggaccctctggtgtacccatatgttttgctttta
agcatccagttgataccaggtgtggtatacttgtccaaggaaactggagatgaaggatat
aacattgacgctgcccacatatcaattgtgctagcagaccatggggtcctttctgaagga
gctggggctggacagaaaatgggcgtgatggatgcttacgcagaggcatctagtataatc
aggcagtatgggtctgtgtatttacgtcttggtaatcttcaggtggcattagaatattat
gcacaagctgctgctgcagttggtggtgggcagttgtcatggtctggaagaggtaatgtg
gatcagcaaaggcagagaaatttgatgctgaagcagctccttacagaactgttgttacgg
gatgggggcatctatcttttacttggttcaagaggtgccggagaagaaggtgaattgggg
cgatttttgactgatgcaaaagaaagacaacaatttctgcttgaagctgctcaccaatgt
caggaagctggattgtatgaaaagtctatagaaattcagaaacgaataggggcattctcg
atggcattggatacgattaacaagtgcctttctgaagctatttgtgccctctcacgtggt
agattggatggtgagagtcgaactgctggtctcattcactctggaaatgagatcttggag
atgcacaaatattatcctgaaatcagtcctcaagagagggaaagtgtttcagagcagcat
attgtgttaagacaacttgaggccgtactgtcaatccataaattggcaagaggaggccat
tatgctgatgctttgagggaggttgccagacttccatttcttccattagatccccggaca
ccagatgctaccactgatgtgttccagaatttatctcctcatgtccaagcctgtgttccg
gacctcctgaaggttgcactcacttgtctggacaacatggtggattctgatggatcgctt
cgcgccttgagggctaagattgctagcttcattgcaaataattccagtaggaattggcct
cgcgatttgtatgagaaagttgcccggagcttttaa
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