Prunus avium (sweet cherry): 110773611
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Entry
110773611 CDS
T05161
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
pavi03015
mRNA surveillance pathway
pavi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110773611
09122 Translation
03013 Nucleocytoplasmic transport
110773611
03015 mRNA surveillance pathway
110773611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110773611
03041 Spliceosome [BR:
pavi03041
]
110773611
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110773611
Spliceosome [BR:
pavi03041
]
Complex C
Other components
EJC/TREX
110773611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
110773611
NCBI-ProteinID:
XP_021833832
UniProt:
A0A6P5U3D7
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MSSPYPILDNRPIDQWKVTELKEELKKRKLTTKGLKDDLIKRLDEAIRIESANADNGLNG
DPQPVVGVKVVEPRSGSRTPKSIGSGGRKRTEKVDVPVQIDNRAATLDQGNIQEGYILVD
KDACAIVEEGLGQSTTVETTVETSVTVTESVVTEEAVVVQDSQYTEASKGNWNSKPLLEN
EDAKPLLENEDPKPRLENEDPKPQLENEDPKPQLENEEPEPQLEDPKPQLEDPKPQLENV
DLKPQLENEALKPQLEIEDLKPQLENEGLEPTAKDDMLGSSASNYQVSEVSTLGSEVKYD
SISTDSVSINETIELKDNIIADHVKLELDIVKPEMVDPSSSTVVPVSGDSHPMDVDEPLE
DKASLGEKDDNITNADISKKNDNADLGYSEILNLERSSGDDSMEEDVLDSKQIDSKYSSD
DVGDIGEKNEVPIVNEESRAGIVGDDIATDKNDVSVENKNHPALPAEKRKLNDQAAVGSN
EPVKRRRWNSENLKVPELQSPLQTPSVTPKDTFQSPSLKRSFSRSNSTMSEDAPKERVVP
PSQKPPTNSLRIDRFLRPFTLKAVQELLGKTGKVTDFWMDHIKTHCYVTYSSTEEALETR
NAVYNLQWPPNGGRLLVAEFVDPQEVQTRVQIPQTPATPISSGPAVPVAPSTSQPQPSPR
QPRQQLPPPPSLPPPPPLTAPSSARERLPLPPPPPLPEKLDTPIVTLDDLFRKTKSTPRI
YYLPLSEEQVAEKLAAQGKNAKQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaccatatccaattctcgataatcgaccaattgatcaatggaaggttacagag
ttaaaagaggagctcaagaagcggaaattgacaaccaagggtttgaaggatgatttgata
aagcgtttggatgaagcaatacgaattgaaagcgcaaatgctgataatggtcttaatggt
gatccccaacctgttgttggggtgaaagttgtagagccacgttcaggttctagaacacct
aaaagtattggttctggtggacgtaaaaggactgaaaaagttgatgttccagttcagatt
gacaaccgcgcagcaaccttggatcaagggaatattcaagaaggttatattttggtggat
aaagatgcatgtgctattgttgaagaggggctgggtcaatcaactactgtggaaaccact
gtggaaaccagtgttacggtcaccgagagtgtggtaactgaggaagcagtagttgtgcaa
gattcacagtacactgaagccagtaaggggaattggaattcaaagcccctactggagaat
gaggatgcaaagcccctgcttgagaatgaggacccaaagccccggcttgagaatgaggat
ccaaagccccagcttgagaatgaggatccaaagccccagctggagaatgaggaaccagag
ccccagctggaggatccaaagccccagctggaggatccaaagccccagctagagaatgtt
gatctaaagccccagctggagaatgaggctctaaagccccagttggagattgaggatcta
aagccccagctggaaaatgagggtttagagcctacagccaaggatgacatgctcggctct
tctgcttcgaactaccaggtatctgaggtcagcactttagggtctgaagtaaaatatgat
tctatttctactgattctgtgtcaattaatgaaacgattgaactaaaggataatataatt
gctgatcatgtcaaattagaattagatattgttaagccggagatggtggacccatcatcc
agcactgttgttccagtcagtggtgattcacatccaatggatgttgacgagccacttgag
gacaaggcatctcttggagagaaagatgacaacattacaaatgcagacattagcaagaaa
aatgataatgcggatttggggtactcagaaatattaaatttagagagaagttctggagat
gattctatggaagaagatgtgttggacagtaaacaaattgattcaaaatatagttctgac
gatgtgggagatattggtgagaaaaatgaagttcctattgtgaatgaggaaagtcgtgct
ggtattgtgggagatgatattgccacagacaaaaatgatgtaagtgttgagaacaagaat
catccagctcttcctgctgagaaaagaaagcttaatgatcaagcagcagttggaagcaat
gagcctgtaaagaggcgcaggtggaactctgaaaaccttaaagttccagagctgcaaagc
cctcttcaaacaccttcagtcacacccaaggatactttccagagccccagtttgaagcgt
agcttttcaagatcgaactctacaatgagtgaggatgcccccaaggaacgtgttgttcca
ccatcgcagaagcctccaactaattcccttagaattgatcgttttctgcgacctttcacc
ttgaaagctgtgcaagaacttttaggcaaaactgggaaggttactgatttctggatggac
cacatcaagactcattgctatgttacttattcatcaacggaagaagccttggagacacgg
aatgctgtgtataacctacagtggccccccaacggtgggcgccttttagtggctgagttt
gttgatccccaggaagtgcaaacacgggttcagattcctcagactcctgctacacccatc
agtagcggtcctgctgtacctgttgccccatccacctcacagccacagccttcaccccgt
caacctaggcagcagcttccaccacctccttctcttccacctccaccacctttgactgcc
ccttcctcagcaagagaacggcttcctttgcctcccccacctcctctaccagagaaactt
gatacaccgattgtcactttggatgatctctttcgaaaaaccaagtcaactcctcgaatc
tattacttacctttgtcggaagaacaagtggctgaaaaacttgcagcacagggcaaaaat
gccaagcagtag
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