Prunus avium (sweet cherry): 110773616
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Entry
110773616 CDS
T05161
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110773616
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110773616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
CTK3
TEX13
OEP
SKA1
Stathmin
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
110773616
NCBI-ProteinID:
XP_021833838
UniProt:
A0A6P5U186
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRSKAELVVATWDKQFHNAQMVQKVPL
LYLANDILQNSKRKGNEFVTEFWKVLPAALKVVIEEGDDHGKTVVSRLVGIWEERRVFGS
RARSLKELMLGEEVPPPLEFSGKKRSRSVRIVKRDSRSIRTKLSIGGPAEKIVSAFHSVI
SEHPTEDAEMSKCKSAVHRVRKLEKDVDIACTNAKDPKRKTLSKELEEEENLLKQCIEKL
KLVEASRVALVSQLKEALHEQESELENVRTHMQVAQAQAEEATNMRKRLNDEDYVFKPSS
ATSPPTDGNSKRGQTPRKSAAAIAALVADKLAASSSSQLIMTSVLSTFAAEEAKNAGLTK
PSTSSNSFTSMPKSSGTDSMSKPERSMPVSDANVFMSAQPPAVPPNHSYQSALVPQPQNQ
APTSQGQFHMLPNPPSQQYLQPAGGVMSSYGYGSIPPLPLGPPPPPPHMVSPMVPLTQQP
LQMNQQAVQITQQQPIPLTQQPPAPSFRPLQPPGMVYYGHPHNSQ
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgtattcagtgagcagatacttgcagacaagctctcgaagctcaacagcaca
cagcaatgcattgaaactttgtcacattggtgtatatttcaccgaagcaaagcagaactg
gttgttgcaacatgggataaacagttccataatgcacagatggttcagaaagttcctctc
ttgtatcttgcaaatgacatcctacagaacagtaagcgtaaaggaaatgaatttgttact
gagttttggaaggttcttccagctgcgctcaaagttgttattgaggaaggcgatgatcat
ggaaagactgttgtctctagattagttggaatatgggaagagaggcgagtatttggctct
cgtgcccggagcctcaaagaactaatgcttggggaagaagtgcctccacccttggaattc
agcggcaagaagcgctcacgttcagtcagaattgtaaaaagagattcacgctctatcaga
acgaaactttccattggtggtccagctgagaagatcgtatctgcatttcactcggtgatc
agtgaacatcccactgaagatgctgagatgagtaaatgcaaatctgcagttcatcgtgta
aggaagttggagaaagatgttgacatagcctgtactaatgcaaaggatccaaagcggaaa
actttatcaaaagaactagaggaggaagaaaatcttttgaagcaatgtattgaaaaactt
aaattagttgaagcaagtagagtagcgcttgtatctcaattaaaagaagctctgcatgaa
caggaatctgaactggagaatgttcggactcatatgcaggtagcacaggcacaggcagaa
gaagccacgaacatgcggaagcgactcaatgatgaagattatgtatttaaaccatcaagt
gcgactagtccaccaactgatggaaattctaaaaggggacaaacacctaggaaatcagct
gcagccattgcagctttggttgcagacaagcttgctgcttctagttcttctcaattgatt
atgacttctgttctttctactttcgctgctgaagaagcgaagaatgctggtctgacaaag
ccctccacgtcttcaaattcattcacatccatgcccaagagttcggggactgattcaatg
tccaaacctgaaaggtccatgccagtttcagatgccaatgtttttatgtcagcacagccg
cctgctgtgccgccaaaccattcgtaccaatcagcattggttccccaacctcagaatcaa
gcccccacctctcaaggtcaatttcacatgcttccaaacccaccctcccaacaatattta
cagccagcaggaggggtcatgagctcatatggttatgggagcattccacctttgcctcta
ggaccaccacctcccccacctcatatggtgagtccaatggtgcctttgactcaacagcca
ttgcaaatgaatcaacaggccgtacaaattacccagcagcaaccaatacccttaactcag
caacctccagctcctagtttccggccacttcagccacccggaatggtgtattatggtcat
cctcataattctcagtga
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