Prunus avium (sweet cherry): 110773723
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Entry
110773723 CDS
T05161
Name
(RefSeq) uncharacterized protein LOC110773723
KO
K10756
replication factor C subunit 3/5
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03030
DNA replication
pavi03410
Base excision repair
pavi03420
Nucleotide excision repair
pavi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110773723
03410 Base excision repair
110773723
03420 Nucleotide excision repair
110773723
03430 Mismatch repair
110773723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pavi03032
]
110773723
03036 Chromosome and associated proteins [BR:
pavi03036
]
110773723
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110773723
DNA replication proteins [BR:
pavi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110773723
DNA Replication Termination Factors
ELG1-RFC complex
110773723
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
110773723
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110773723
Check point factors
HRAD17(Rad24)-RFC complex
110773723
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
Motif
Other DBs
NCBI-GeneID:
110773723
NCBI-ProteinID:
XP_021833942
UniProt:
A0A6P5U3P1
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MENNWSRHGRNSVTPVKQRRSGYEPSDAETEIPDSPWHGGKMRINVGLEYEGTKAELDLA
RNISPLKQSRGHSSRIEYDGPSLRTNSVVSPVRRRNSSKSPYKPRRDDGNARNSPLAGSD
LHRNISPLSKSERRRHVSPFQAERGEHDLNGFDDEIVGSNRKQQHHRRNSREEKKPNYSR
RSTTAPRHRSPREVDQQNSYDQTPTKGERSRTPTKVERTPSPLSKNMAQKQRPVNSQMKS
PSVGEINEMLANAKLARTSPNPLSNNKAPVFGSSDSISPGDIFFSRECTVMALPRKVLVN
NGGFEGPYSPKRKMVPQRDFAASQHRSRTNGSYDLNGNGRGTPSPYGLSQTTTTTSSSAV
SRQSSGTLSVGSSKRSDASGTTTASMRKFTENRRKSESQAWFSCMRKGACKTKKSPERST
FNEAAFIEKAFVVESLRQFWADKHRPASLNGFTCHKQEAQILKQLVIDNISPHILFTGPS
GSGKKALTMAYLRETYGDSSWEEQKPIQVVVPLTSSAQHVELNVQLEANARYALMGLVRE
INNENAIAPEVSTVNFKANHKVIVLYGVDKAAEHIQHLIKWIMDCYSDACKLILCCENDA
AVIESVKNRCKVIKVDAPVTHEIMEVLIQIARKEDFDLPMSFANKIAIKSKQNLRKAIMG
LEACKAHNYPFGDDQPIPLGWEEVLLELAAEILADPSPKRLFFIRGKFQKLLVDFVHPKL
ILLKLVEQFLKGLDGSTKRELYYWHAYYEKRLPAGASALLKLEEFVAKFMSIYRKSSNNR
QYA
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggagaataattggtcaaggcatggtagaaattctgtgactccagtgaagcaaaggagg
agtggatatgagccgtctgatgctgagactgaaatcccagatagtccgtggcacggcggc
aagatgaggattaatgttggcttggaatatgaagggacaaaagcagagttggatttggca
agaaacattagccctttgaagcagagcagggggcactcttcaagaattgaatatgatggc
ccttctcttagaactaactctgtagtgagcccagttcgaagaagaaatagcagcaagtca
ccctacaagccaaggagagatgatggtaatgcacgaaattcaccattggcgggttctgat
cttcatagaaatattagccccttgtcaaaatctgagcgcagaagacatgtttcacctttc
caagctgagaggggagagcatgatttgaatggttttgatgacgagattgtgggctcaaac
agaaagcaacagcatcacagaaggaacagcagagaagagaagaaaccaaactacagcagg
agatcaacaactgctccaagacatagatcaccaagagaagttgaccaacaaaatagttat
gaccaaacaccaactaagggggagagaagtagaacaccaactaaagtggagagaacacca
tcaccattgtcaaaaaacatggctcagaaacaaaggccagtgaactcccagatgaaatcg
ccgtccgttggtgaaatcaatgaaatgcttgccaatgcaaagcttgctagaacttctcca
aatcccctgtccaataacaaagctccagtttttggaagctcagactctatatcaccaggt
gacatcttcttttctagagagtgcacagtcatggcattgccaagaaaggtcttggtgaac
aatggtggttttgagggcccctatagtcccaagcgcaaaatggttccccagagagacttt
gctgcctctcaacacagaagcagaacaaatggtagttatgatcttaatggtaatggtaga
gggactccatccccttatggcttgtcacagacaaccactaccacatcaagctccgccgtg
agcaggcagagcagtggtacgcttagcgttggaagcagcaagaggagtgatgcaagtggg
accacaacggcaagcatgaggaaattcacagaaaatcgaaggaaaagtgaaagtcaggca
tggttttcgtgtatgagaaagggtgcttgcaagactaaaaaatcacctgagcgtagtaca
ttcaatgaagctgcattcattgagaaagcatttgtggttgagagtctcagacagttctgg
gctgataagcaccgacccgcttcgttgaatggattcacttgccacaaacaagaagctcaa
attctgaagcaacttgtgattgataacatctctcctcatattttgttcactggaccatct
ggttcggggaagaaggctctaacaatggcttatctacgagaaacatatggtgattcaagt
tgggaagaacaaaagccaatccaagtagtggttccattgacatccagtgctcaacatgta
gagctcaatgtacaattggaagcaaatgctagatatgcattaatgggtttggtcagggaa
ataaacaatgagaatgcaattgctcctgaagtcagcactgttaatttcaaggcaaatcat
aaagtgatagttctttacggtgttgacaaagcagcagagcatattcagcatttgataaaa
tggataatggactgttactcagatgcttgtaagctcatactctgctgtgaaaacgatgca
gccgtcatcgaatcggtgaaaaaccggtgcaaggttatcaaggttgatgctcctgtaact
catgaaattatggaagttcttattcagattgcaaggaaggaagacttcgacctacctatg
agctttgctaataagattgctattaaatcaaagcagaacttgagaaaagcaatcatgggt
cttgaagcatgcaaagcacacaactatccttttggagatgatcaaccaattccgcttgga
tgggaagaggtgctgcttgaacttgctgctgaaatcctagctgatccatcacctaagaga
ttatttttcatccggggaaagtttcaaaagcttctcgttgattttgtgcatccgaaactg
attctactgaagctcgtggaacagttcctgaagggactagatggtagtactaaaagggaa
ctttattattggcatgcttattatgagaaaagactcccagcaggagcgagtgctttactg
aaactagaagaatttgtggctaagttcatgagcatataccggaagagttccaacaatcgt
caatatgcttag
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integrated database retrieval system
