Prunus avium (sweet cherry): 110774047
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Entry
110774047 CDS
T05161
Name
(RefSeq) uncharacterized protein LOC110774047
KO
K14315
nucleoporin NDC1
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110774047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110774047
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110774047
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
110774047
NCBI-ProteinID:
XP_021834262
UniProt:
A0A6P5U4P1
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MASSSPPGMVVHNRFLGFLIWQSIPSTVIFFIFKTLSSTISSTSHSTAKPPFPFAPSVFA
FVTFLTFHLSQLLFSFSLSLISSPHPHRLASPLHLALGLIRFLFVPGGSDLSESPESRVR
AKLSVGFLLFLAAAAVSGFVAVVSVCVKFGDGVGVIGAVGFRGFVMGLLYGLYYVYYRRW
VFEFPIIQRPPFFSFKMGLPSAITRSLKLSCLASLFSAFLVVFLPHQLHNQATIGKVIAE
QIIFYVGSFLVFLCWEISHHLHQVLHTKRFVFAPPKGSAAAETNPSEHLLAALEESSPNS
LLQYLAYLDLYMVCENNVDTWRRAAFFEESGETYKRVISVCLRPLEQLASKLGEGLESSV
EKSSQISNQLLSPTDQRLDPKYSEPLNNFQLYAWCAWTAASLTTCSHREDRFGVAQLSGS
NAAVISTLISCLLAIETYMGKKTNLQSAQHFMGSTGFKLRTSSTGNIGMGKKRAGPLHSK
AYAIADVLRNSIYHVVSTFHDQMASSAKKGLLEKDWIISDKPPFGEREHLVQKLHLFLDF
RTS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcttcgccaccaggcatggtggtccacaaccgcttcttagggttcctcata
tggcaatctatcccctccactgtcatcttcttcatcttcaaaaccctctcatcaaccatc
tcttccacttctcactccaccgccaaacccccattcccatttgccccgtctgtttttgcc
tttgttacattcttgaccttccacctttcacagcttctcttctccttctcactctccctc
atctcctcaccccacccccaccgcctagcctctcctcttcacctcgctctcggcctcata
cgcttccttttcgttcccggtggctccgatttatcggagtctcccgagtctcgggttcgg
gctaagttatcggtcgggttcctgctgtttttggcagcggcagcggtttcggggttcgtt
gcggtggtttcggtgtgtgtgaaatttggtgatggggttggggtgattggggcagtgggg
tttaggggttttgtgatgggtttgctttatggcttgtattatgtctattaccgcagatgg
gtcttcgagtttcccattattcagcgtcctccttttttcagcttcaagatgggactccct
tcggctatcacacgatccttgaagctatcctgcctggcatctctattttcagcttttctg
gtggtgtttctgccccaccagcttcataaccaagctacaatcggaaaggtcattgctgag
cagattatattttacgttgggagtttcttagtgtttctctgctgggaaataagtcaccat
ttacatcaggtgcttcatacaaagaggttcgtatttgcaccacctaaaggatcagcagca
gcagaaacaaatccaagtgagcatcttcttgcagctctggaagaaagcagtcctaattct
cttctccagtatcttgcatatcttgatctctatatggtttgtgagaataatgttgatact
tggcggcgagctgcattttttgaagaaagtggtgaaacttacaaaagagttatatctgta
tgcttgcggcctctggagcagcttgcatcaaagttgggcgaaggcttggaaagttctgtt
gaaaaaagctcccaaatatccaatcagttactgtcaccaactgaccagcgactagaccca
aaatactctgagccattgaacaacttccagctatatgcgtggtgtgcctggacggctgcc
tcactgactacatgctcacacagagaggacagatttggggttgcccagctttctggcagt
aatgctgctgtgatctcaacactgatttcttgtcttcttgctattgaaacatacatgggg
aagaagaccaatttgcaatctgcacagcattttatggggtcgacaggttttaaattgaga
acctcgagtacggggaatattggcatgggtaaaaagagagctggcccccttcattcaaaa
gcatatgccattgctgatgttctgaggaactcaatctaccatgttgtgtctactttccat
gatcagatggcgagcagtgctaaaaagggtcttcttgagaaggattggatcatcagtgac
aagcctccttttggagaacgcgagcatctcgtgcagaaattgcatcttttcctggacttt
cgaactagctaa
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