Prunus avium (sweet cherry): 110774156
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Entry
110774156 CDS
T05161
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pavi03009
]
110774156
Ribosome biogenesis [BR:
pavi03009
]
Eukaryotic type
90S particles
Other 90S particles
110774156
Pre-60S particles
Other pre-60S particles
110774156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_RFWD3
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_Aladin
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_SCAP
Beta-prop_WDR41
NBCH_WD40
Beta-prop_VPS8
Beta-prop_Nup120_160
WDR54
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
110774156
NCBI-ProteinID:
XP_021834392
UniProt:
A0A6P5U546
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MISAISWVPRGVSKPVPSVADPPTKEEIDELIKTGALERSGDGESEDDDGEMDVETPKKG
DQISQALEVAKALGKASKVTESGTKFDDITDGLRELDMEHYDDEEDGIDPFSSGLGDLYY
PSNDMDPYLKDKDDDEESEDSDDMTINPTDSVIVCARNEDDVSQLEIWLYVESEDGESNV
YVHHDVIISSFPLCTAWLDCPLKGGDKGNFIAVGLMDEPSIEIWDLDIIDEVQPCVVLGG
IAEMKKKKGKKASIKYKEGSHRDSVLGLAWNKFYRNVLASASADKQVKIWDVATGKCTIT
MEHHTDKVQAVAWNYFAHQVLLSGSFDHSVVLKDGRASSHSGYKWTVTADVESLAWDPHT
EHSFVVSLEDGTVKGFDIRAATSSSTSESKPSFTLHAHDKAVCAISYNPSAPNLLATGST
DKMVKLWDVSNNQPSCISSRNPKAGAVFSVSFSEDNPFLLAIGGSKGTLEVWDTSYDAAV
AQRFGSYIKKSRTPPGS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgatatcagcaatttcttgggtgcccaggggagtttcaaagccagttccctcagtcgcc
gacccgcccaccaaagaggaaatcgatgagttaataaaaaccggtgctttggagagaagt
ggagatggtgaaagtgaggacgatgatggagaaatggatgttgaaaccccaaagaagggt
gatcaaatctcccaagcattagaggtagcaaaagcactcggcaaagcttcaaaagttaca
gagtcagggaccaaatttgatgatataaccgatggattgagggaacttgacatggaacat
tatgatgatgaggaggatggcattgacccgtttagtagtgggcttggagacctttactac
cctagtaatgatatggatccatatctcaaggataaggatgatgacgaggagtctgaagac
agtgatgacatgaccattaacccgactgattcagtcatagtatgtgcccgcaatgaggat
gatgtcagccagcttgagatttggctgtatgtcgaatcagaagatggtgaatcaaatgtt
tatgtgcaccatgatgtcatcatttcatcgttccccctttgcacagcatggcttgattgt
cctctcaaaggtggagacaaagggaatttcatagctgttggtttaatggatgaaccttcc
attgagatttgggatcttgacattattgatgaagtacaaccatgtgtggtattgggcggt
attgctgagatgaagaaaaagaaaggaaagaaggcatcaatcaaatacaaagaaggcagc
cacagagattcagttcttgggcttgcttggaataagttctacagaaatgtacttgctagt
gcaagtgctgacaaacaagttaagatttgggatgtggctaccggaaaatgtactattacc
atggagcatcatacagacaaggttcaggcagttgcatggaattattttgcccatcaagtt
cttcttagtggatcttttgatcattcagtagtcttgaaagatgggagggcgtcatcacat
tctggctataaatggacagtcacagctgatgtagaaagcttagcatgggatccacacact
gagcattcatttgtggtgagccttgaagacggcacagtcaaaggttttgatattcgggct
gccacatcttcttctacttctgagtctaaacctagttttactcttcatgcacatgacaaa
gctgtttgcgcaatctcctataacccctcagcacctaatcttcttgcaactggatccacg
gacaaaatggtaaagctttgggatgtgtcaaacaaccaaccctcatgcatttcatccagg
aaccctaaagcaggagctgtgttttctgtttcgttctcagaagataacccgtttttgctt
gccataggaggctcaaaagggactctggaagtatgggatacatcatacgatgctgcagtt
gcccaaagatttgggagttacatcaagaagagcagaaccccacctgggtcttga
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