Pseudomonas avellanae: BKM03_01085
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Entry
BKM03_01085 CDS
T05369
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00300
Lysine biosynthesis
pavl00470
D-Amino acid metabolism
pavl01100
Metabolic pathways
pavl01110
Biosynthesis of secondary metabolites
pavl01120
Microbial metabolism in diverse environments
pavl01230
Biosynthesis of amino acids
Module
pavl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BKM03_01085
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BKM03_01085
Enzymes [BR:
pavl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BKM03_01085
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AVB18026
UniProt:
A0AAD0DUJ1
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All DBs
Position
complement(202108..203346)
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AA seq
412 aa
AA seq
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MKTLADTQLSRLADQYGTPLWVYDGQLIKKRVQQLAAFDTVRFAQKACSNLHILRLLRDA
GAAVDAVSLGELERALHAGFSAQTAQGTAGVVFTADVFDRATLQRVVEAQVEVNVGSIDM
LHQLGALSPGHRVWLRINPGFGHGHSRKTNTGGENSKHGIWHTHLQDALKLVRHYRLHLV
GLHMHIGSGVDYQHLQQVCSTMAELVVEMDHDIEAISAGGGLSVPYRAGELPINTSHYFA
QWDHARKRIEAHLGHPIRLEIEPGRFLVAQAGVLVSEVRATKHMGGKHFTLVDAGFNDLM
RPSLYGSYHEMSLITSRDEPLPMQETVVAGPLCESGDVFTQAEGGIVESRLLPVAQVGDY
LVFHDAGAYGASMSSNYNSRTHAAEVLVDDGQERLIRRRQPLDDLLRLEEDC
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccctcgctgacactcagctgtccagactggccgatcaatacggcaccccgctg
tgggtgtacgacggtcaattgattaaaaaacgtgttcagcaactggctgcattcgacacg
gtgcgctttgcgcaaaaagcctgttccaaccttcatatcctgcgcctgttgcgcgacgct
ggcgcggcggtggatgccgtctcactgggggaactggagcgcgccctgcacgcaggtttc
agcgcccaaactgctcagggcacggccggtgtggtgttcactgctgatgtgtttgatcga
gccaccttgcagcgcgtggtcgaggcacaggtcgaggtgaatgtcggttcgatcgacatg
ctgcatcaactgggcgcgctttcccccggccaccgtgtatggctgcgaatcaacccgggc
tttggccacggccacagccgcaagaccaacaccggcggcgaaaacagcaagcacggcatc
tggcatacgcacctgcaggatgcgctgaagctcgtccgccattaccggttgcatctggtc
ggcctgcatatgcacatcggctcgggggtcgattaccaacacctccagcaggtctgcagc
accatggcagaactggttgttgaaatggaccacgatattgaagccatctcggccggtggc
ggtttatccgtgccctatcgcgcaggcgagttgccgatcaataccagccactatttcgct
cagtgggaccacgccagaaaacgcatcgaagcccatctcgggcaccccatacgcctggaa
atcgagcctggccgttttctggtcgcgcaggccggtgtgctggtgtccgaggtccgtgct
accaagcacatgggcggcaagcacttcacgctggtcgatgcagggttcaacgacctgatg
cgtccttcgctgtatggcagctatcacgagatgtccctgatcacctcgcgcgacgaaccg
ctgccaatgcaggaaaccgtagtggccggcccgctgtgcgagtcgggagacgtgttcacg
caggccgagggcggcatcgtcgagtcccgtctgctgcccgtcgcgcaggtgggtgactac
ctggtttttcatgatgccggggcttatggcgcgtccatgtcatccaactacaacagccgc
acccacgcggcagaagtgttggttgatgacgggcaggaaaggttgatcagacggcgtcag
ccactggatgatctgctgcgacttgaagaagactgttaa
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