Pseudomonas avellanae: BKM03_01880
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Entry
BKM03_01880 CDS
T05369
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
BKM03_01880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
DUF7526
Motif
Other DBs
NCBI-ProteinID:
AVB18163
UniProt:
A0AAD0DXV9
LinkDB
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Position
complement(360171..362492)
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AA seq
773 aa
AA seq
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MDSINSRVAEELGVRPQQVAAAVALLDEGSTVPFISRYRKEVTGSLDDTQLRHLEERLRY
LRELDDRRVSILASIEEQGKLTPELARDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPSLTPDAEAARFVDAEKGVADVKAALEGAKYILMERFAEDASLLEKLRS
FLKQEAVISARVVPGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGFLSSALKVG
EELPGAMHPCELMIGERFGIQNQSRSADKWLAEVVRWTWKVKLYSHLETDLLGELREGAE
TEAINVFAHNLHDLLLAAPAGQRATLGLDPGLRTGCKVAVVDATGKLLDYATVYPHVPKN
QWDQTIAVLAALCAKHSVDLIAIGNGTASRETDKLAADLIKKYPGLKVTKVMVSEAGASV
YSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNTTLAQNIVAHRDENGAFKTRAALKKVSRL
GEKTFEQAAGFLRVMTGDNPLDSSAVHPEAYPLVQRIAAETDRDIRSLIGDASFLKRLDP
KKFTDETFGLPTVTDILQELEKPGRDPRPEFKTAAFQDGVEDLKDLQPGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKIDGARGARPGSSPRQQNSAPRKEATAPAPANNAMASLFANAKQLKKR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcgtcgccgaagaactcggcgtacgcccacaacaggtcgca
gcggccgtagcactactggatgaaggctcgaccgtgcccttcatttcccgctaccgcaag
gaagtgaccggcagtctcgatgacacgcaattacgccatctggaagaacgtctgcgctat
ctgcgcgaactggacgaccggcgcgtcagcattcttgccagcatcgaagagcaaggcaag
ctgaccccggaactggctcgcgacatcaagctggccgacaccaagacccgccttgaagat
ttgtacctgccttataagcagaaacgccgtaccaagggccagatcgcccttgaagcgggc
ctcggcgagctggctgacggcctgttcaacgacccgagcctgaccccggacgccgaagcc
gcccgttttgtcgacgccgagaaaggcgtggccgacgtgaaagctgcgctggaaggcgcc
aagtacatcctgatggagcgcttcgccgaagacgcctcgctactggaaaaactgcgcagc
ttcctcaagcaggaagcggtgatcagcgcgcgcgtggtgccgggcaaggaagaggaaggc
gccaagttccgtgactactttgaacacgacgagccgctcaaaagcatgccgtcgcaccgc
gcgctggcgattttccgcggccgcaacgaaggttttctcagctctgcactgaaagtcggt
gaagaactgccaggtgccatgcacccgtgcgaactgatgatcggcgagcgtttcggcatc
cagaaccagagccgctcggcggacaaatggctggccgaagtggtgcgctggacctggaag
gtcaagctgtacagccacctcgaaaccgatctgctgggtgagttgcgtgaaggcgccgaa
accgaagccatcaacgttttcgcccacaacctgcacgacctgttgctcgccgccccggct
ggccagcgcgccacgttgggcctggacccaggcctgcgcaccggctgcaaggtcgcggtc
gtggatgccaccggcaaactgctcgactacgcgacagtttatccgcatgtgccgaaaaat
cagtgggatcagaccatcgccgtgctggctgccctgtgcgccaagcactcggtcgatctg
atcgctatcggcaacggcaccgccagccgcgaaaccgacaagctggccgccgacctgatc
aaaaaatacccaggcctgaaagtgaccaaggttatggtttccgaagcaggtgcatcggtt
tattccgcctcggaactagcggccaaggaattcccggacctcgacgtatcgatccgtggc
gcagtgtcgattgcccgccgcctgcaggacccgctggccgaactggtgaaaatcgatccg
aagtccattggtgtcggccagtaccagcacgacgtgtcgcagctcaaactggctcgcggc
ctggatgcggtggttgaagactgcgtgaacgccgtgggcgtggacgtaaacaccgcttcg
gtggcgctgctggcacggatttccggcctcaacaccacgctggcgcagaatatcgtcgcg
catcgcgacgaaaacggtgcgttcaagacccgcgcagcgctgaagaaagtcagccgtctg
ggcgaaaagacctttgaacaggccgcaggcttcctgcgcgtcatgaccggtgacaacccg
ctggactcgtctgccgttcacccggaagcctatccgctggtgcaacgcattgcggctgaa
accgaccgcgacatccgttcgctgatcggcgacgccagctttctcaagcgtctggacccg
aagaagttcaccgacgagacctttggtctgccgaccgtcaccgacattttgcaggaactc
gaaaaaccgggccgcgacccgcgtccagagttcaagaccgcagcatttcaggacggcgtc
gaggacctcaaggacctgcaaccgggcatgatcctcgaaggcgttgtcaccaacgtcacc
aacttcggtgcgttcgtcgatatcggcgtgcatcaggacggcctggtgcacatctcggcg
ttgtccgagaagttcatcaaggacccgcgtgaagcggtcaaggccggtgatgtggtgaaa
gtaaaggtcatggaagtcgacatcccgcgcaaacgcgtcggcctgtcgatgcgcatgagc
gacacacccggcgagaaaatcgacggtgctcgcggcgcacgccctggctcttcgcctcgc
cagcagaacagcgccccgcgcaaggaagccactgccccggcaccggccaacaacgccatg
gcctcgctgttcgccaacgccaagcaattgaagaagcgctga
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