Pseudomonas avellanae: BKM03_01970
Help
Entry
BKM03_01970 CDS
T05369
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pavl03000
]
BKM03_01970
Transcription factors [BR:
pavl03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BKM03_01970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
TetR_N
HTH_3
HTH_Tnp_ISL3
HTH_7
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AVB18181
UniProt:
A0AAD0DUA2
LinkDB
All DBs
Position
complement(380747..381793)
Genome browser
AA seq
348 aa
AA seq
DB search
MADEKPATRKRRGAGRVTITAVARQAGVSAITVSRYFNQPEQVSPELRERIAAVVNTLGY
VPNLVAGGLASARSKVVAMVIPNISGPIFANTIQGFSDTLSQHGFQLLLASSYFSAEQEE
SAVRAFLGWSPAALVLTSRFHSPATEKMIEQTDVPVIETWDHQPDRSPIQIGFSHYDVGV
TAARYLHAKGYRRIAFVQNSVAGDFSALERRDGYAATLEGLGLKPWVFVPDAGRAPFEAG
KQAMETLMSQAPRPDAIVFANDNLAAGALLASQRAGLHIPQDCAVMGFGDYAFAEMMLPS
LTTIKPPALEIGVMAATRVLESLGVLPVEGEIQRLNLLDCRLVEREST
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaaaaacctgcgacacgcaaacgccgaggcgccggccgggtgaccatcacc
gccgtggcacgccaggcgggggtgtcggccatcaccgtgtcgcgctatttcaatcagccg
gagcaagtctcgcccgaactgcgcgaacgtatcgcggcggtggtcaatacgctgggctac
gtgcccaacctggtggcaggtggcctggcgtcggcgcgcagcaaggtggtagcgatggtc
attcccaacatctccgggccgatcttcgccaacaccattcagggcttcagcgacacattg
agccagcatggtttccagttgttgctggcctccagttacttttccgccgagcaggaagaa
agcgccgtgcgggcgtttctgggctggtctccggcggccttggtgctgaccagtcgcttc
cacagcccggcgactgagaagatgatcgagcagaccgacgtcccggtgatcgaaacctgg
gaccaccagcccgaccgcagcccgatccagattggtttttctcactacgacgtcggcgtt
accgcagcccgctacctgcatgccaaaggctatcgccgcatcgcgttcgtacagaacagc
gtcgcgggcgacttcagcgcactggagcggcgcgacggttatgccgcgacgctggaaggg
cttggcctcaagccgtgggtattcgtcccggacgccgggcgagcgccgttcgaggcaggc
aagcaggccatggaaacactgatgagccaagcaccgcgcccggacgccatcgtcttcgcc
aacgacaacctggcagccggcgccctcctcgccagccagcgcgcaggcctgcacatcccg
caggactgcgccgtcatgggctttggcgactacgccttcgcagaaatgatgctacccagc
ctgactaccatcaaaccgcctgcactggagatcggcgtaatggccgcaacccgcgtgctg
gagagccttggggtactgccagtagaaggggaaatacagcgcttgaacttgctcgattgc
aggttggtggagcgggaaagtacgtga
DBGET
integrated database retrieval system
