Pseudomonas avellanae: BKM03_02445
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Entry
BKM03_02445 CDS
T05369
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavl03021
]
BKM03_02445 (rpoH)
Transcription machinery [BR:
pavl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BKM03_02445 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AVB18265
UniProt:
A0A261WJR5
LinkDB
All DBs
Position
481556..482410
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AA seq
284 aa
AA seq
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MTTSLQPAYALVPGANLEAYVHTVNSIPLLTPERERELAESLYYEQDLDAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWTDNSTANLHQALDVLDERSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKTSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcttatgctttagtcccgggtgcaaacctcgaggcctat
gtgcacacggtcaacagcattccattgctgacgccggagcgggagcgtgaactggctgag
agtctctactatgagcaggatctggacgcggcccgacaaatggtcctcgcccacctgcga
ttcgtcgtgcacatcgcgcgcagttattcgggttacggtctggctcaggctgacctgatc
caggaaggcaacgttggcctgatgaaggctgtgaagcgcttcaacccggaaatgggcgtg
cgtctggtgtcgtttgccgtgcactggatcaaagccgaaatccacgagttcatcctgcgc
aactggcgcatcgtcaaggtcgccacgaccaaggcgcagcgcaagctgttcttcaacctg
cgcagccagaagaagcgtctggcctggctgaacaatgacgaggtgcatcgcgtcgccgaa
agcctgggtgtcgagccgcgcgaagtccgcgaaatggaaagccgcctgaccggccacgac
atggccttcgacccggcagccgaagcggatgacgacagcgccttccagtcgccggccaac
tacctggaagaccaccggtacgacccggcgcgtcaactggaagatgcagactggaccgac
aactccaccgccaacctgcatcaggcgctggatgtgctggacgaacgcagccgcgacatc
ctctaccagcgctggctggcagaagaaaaagccacgctgcacgacctggcgcagaagtac
aacgtctctgccgagcgcatccgccagctggaaaaaagcgcgatgaacaagctcaagacg
tcgattgctgcgtaa
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