Pseudomonas avellanae: BKM03_03115
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Entry
BKM03_03115 CDS
T05369
Name
(GenBank) LPS-assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pavl02000
]
BKM03_03115
Transporters [BR:
pavl02000
]
Other transporters
Pores ion channels [TC:
1
]
BKM03_03115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_2
LptD_N
OstA_2
Motif
Other DBs
NCBI-ProteinID:
AVB18378
UniProt:
A0AAD0GLQ9
LinkDB
All DBs
Position
complement(619051..621831)
Genome browser
AA seq
926 aa
AA seq
DB search
MALKSPAFRKKFPLLVTGSLLAMQPLATQFVVAAEQYDCSVSASGAWNCAPKSTAAAVEL
PPRPVHSTASVSSNGTVTSESSSSGEQVAGTQLVTEAKGKGLKSRSADYSHLDWVPREKL
TAAQLAETGPYCSGAYVEPIRPGMDDKTPMKDAPMFVGAKASRYEQEAQVATLAGDVVLR
QGSMQVQAQEAALHQAENRGELNGDVRLRDNGALIVGDKAELQLDTGEARVDNAEYVLHK
SNIRGNALYAKRAENAIIRLKDGTYTTCEPNSNAWTLKGNNITLNPATGFGTATNVTLRV
KDIPVLYTPYIYFPIDDRRQSGFLPPTIAAGGDNGFTLVTPYYFNLAPNYDATLYPRYMA
DRGLLMEGEFRYLTKGSEGQFGGAYLNDENDDRKLQSDYDKTRWMINWQHKGGLDTRWLT
QVDYTDISDPYYFQDLETDQIGVKRTDFLNQQGSLTYRGDSYSAVFNAQAYKLATVANVT
PYNRLPQLTLNGTLPYNPGGLKFDYQTEAVRFERDLRSGSFIDENGNPETRLDNNITGLA
RANGDRLNLAPSVSLPMNWSYGFLTPKLKYVYTQYALDLDSQGKSSLLAGEEYNSSESRS
VPIFSVDSGLYFDRNTNWFGKDYRQTLEPRLFYLYVPEKDQTDIPVFDTSESTFSYSSLF
RDNRFTGSDRIGDENKLSLGITNRWIEDNGFERQRFSIGQALYFEDRKVQLPGVAFADRD
DARANVSPYALEYEYRFNRDWRFNSDFNWDPDSKSTRSGSAMFHYQPEAEPNKIVNFGYR
YRNDQIRYDESTGRWIVGGGDYGRPGDANYVKDYYKIQQHDFSVIWPIVPQWSVISRWQY
DYNRQRTIEAFGGFEYDNCCWKMRLVNRYWIDYDEFSQAAPQNEQGDRGIFLQIVLKGLG
GVTGAKVDSFLDKGIQGYREREDQAF
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaaatcccccgcgtttcgtaaaaaatttccgttgctcgtaaccggcagtctg
ctggcgatgcaacctctggccactcagttcgtggtcgccgcggaacagtatgactgctca
gtctctgcttcgggtgcctggaactgtgcgccgaaatccactgccgctgctgtagagctg
cctccacgccccgtgcacagcacagcgtcggtcagttccaacggtacggtgacgtccgaa
agcagctcttcgggtgagcaggttgcgggtacgcaactggttaccgaagccaagggtaaa
ggcttgaagtcgcgtagtgctgactacagccacctcgattgggttcctcgcgaaaagctc
accgcagcgcaactggccgagaccggcccgtattgctcgggtgcctacgtcgagccgatt
cgtccaggcatggacgacaagacgccgatgaaagacgcgccgatgttcgtgggagccaag
gcttcgcgttacgagcaggaagcgcaggtcgcgacgctggctggcgatgtggtactgcgt
cagggcagcatgcaggtgcaggcccaggaggccgcactgcatcaggccgagaaccgtggc
gagctgaacggcgatgttcgtctgcgcgacaacggtgcgctgatcgtcggtgacaaggcc
gaactgcaactcgacaccggcgaagcccgtgtcgacaacgccgagtacgtcctgcacaag
tcgaacattcgcggtaacgccctgtacgccaaacgtgcagaaaacgcgatcatccggctc
aaggacggcacgtacaccacgtgcgaaccgaacagcaacgcctggacgctcaaaggcaac
aacatcacgctgaacccggccaccggtttcggcacagcgaccaacgttaccctgcgggtc
aaggacattccggtcctttacacgccgtatatctacttcccgatcgacgaccgtcgccag
tccggcttcctgccgccgaccattgcggcaggcggtgataacggtttcacgctcgttacc
ccgtactacttcaacctggcgccgaactacgacgccacgttgtacccgcgctacatggct
gatcgcggcttgctgatggaaggcgagttccgctacctgaccaaaggcagtgaaggtcag
ttcggcggcgcgtacctgaacgacgagaatgacgaccgtaagctgcagtccgattacgac
aagacccgctggatgatcaactggcagcacaagggcggcctggatacacgctggctgacc
caggttgattacaccgacatcagcgatccgtattacttccaggacctggaaaccgatcag
atcggcgtcaaaagaactgacttcctcaaccagcagggctctttgacctaccgcggcgac
agctactcggcagtgttcaacgctcaggcttacaagctggcgacggttgcgaacgtcacg
ccttataaccggctgccacagctgacgctcaacggtacattgccttacaacccgggcggc
ctgaagttcgattaccagaccgaagctgtccgctttgaacgtgatctgcgcagcggctcg
ttcattgatgaaaacggcaacccggaaacacgcctggacaacaacatcacgggccttgcc
cgggcaaacggtgaccgcctgaacctggcgccatccgtgagcctgccgatgaactggtcc
tatggcttcctgacgccgaagctcaagtacgtctacacccagtacgcactggatctggac
agccagggcaagtcttcgttgctggctggcgaagagtacaacagcagcgaaagccgcagc
gtaccgatcttcagcgtcgacagcggtctgtacttcgaccgcaataccaactggttcggc
aaggactatcgccagaccctggaacctcgcctgttctatctttatgttcccgagaaagac
cagaccgacattccggtattcgacaccagcgagagcacgttcagttattcgtcgctgttc
cgcgacaaccgcttcaccggctccgaccgtatcggtgacgagaacaagctgtcgctgggc
atcaccaaccgctggatcgaagacaacggctttgagcgtcaacgcttcagcattggtcag
gcgctgtatttcgaagaccgcaaggtgcaactgccaggcgtcgccttcgcagatcgtgat
gatgcgcgcgccaatgtttcgccttatgcactggaatacgaataccgcttcaaccgcgac
tggcgcttcaactccgatttcaactgggatccggacagcaagagcacccgttcgggcagc
gcgatgttccattaccagcctgaagccgaacccaacaagatcgtcaacttcggctatcgc
tatcgcaatgaccagattcgttacgacgaaagtaccggtcgctggattgtgggtggtggt
gactacggacgtccgggcgatgccaactacgtgaaggactactacaagatccagcagcac
gatttctcggttatctggccgatcgtgccgcagtggagcgtgatcagccgctggcagtat
gactacaaccgtcaacgcaccatcgaagctttcggcgggttcgagtacgacaactgctgc
tggaaaatgcgtctggtcaaccgttactggatcgactacgacgaattcagccaggcagcg
cctcagaacgagcaaggcgaccgcggcatattcctacaaatcgtgttgaaggggcttggc
ggtgttactggcgccaaagtagacagcttcctcgacaaaggcatccaaggttatcgtgaa
cgtgaagaccaagctttctga
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