Pseudomonas avellanae: BKM03_04065
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Entry
BKM03_04065 CDS
T05369
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00900
Terpenoid backbone biosynthesis
pavl01100
Metabolic pathways
pavl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
BKM03_04065
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pavl01006
]
BKM03_04065
Enzymes [BR:
pavl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
BKM03_04065
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
BKM03_04065
2.5.1.29 geranylgeranyl diphosphate synthase
BKM03_04065
Prenyltransferases [BR:
pavl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
BKM03_04065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AVB18545
UniProt:
A0AAD0GM83
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All DBs
Position
complement(791979..792866)
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AA seq
295 aa
AA seq
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MIASYQAQSQTRVNAALEGLFQAPSPELGRLYEAMRYSVMNGGKRVRPLLAYAACEALGG
VAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FTALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHK
TGALIEASVWLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGA
DIARDKPTYPALLGLDAAKGYALELRDQALAALSPFDAAAEPLRELARYIVERRH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgagctatcaagcgcaaagccagactcgcgtcaatgcagcactcgaaggcttg
tttcaggcaccgagccctgagcttggccgtctgtacgaggccatgcgttacagcgtgatg
aatggcggcaagcgagtgcgcccgctgctggcctacgccgcctgtgaagcgctgggcggc
gtggccgaagatgccaatggcgcggcctgtgcggtcgagctgatccatgcttactcactg
gtgcacgacgatttgccggcgatggacgatgacgacctgcgtcgcggccagccgaccacc
cacaaggcgttcgatgaggcctgcgcgatcctcgccggtgacggcctgcaaagcctcgcc
ttcaccgccctgctcgccccgcacctgagctcgcgtgacgccgaaacccggttgcagatg
gtcagcacactggccgctgccgcaggtccggccggaatggtgggcggacaggccatcgat
ctgggctcagtagggctgaagctggatcaggccgcgctggaatacatgcatcgacacaag
actggcgcgttgatcgaagccagtgtttggctcggtgccctggccagcggtcaggccgat
caggcgcggctcgatgccctgcaggtctatgcacgtgcggtcggcctggcctttcaggtg
caggacgacattctcgacgtcgaaagcgataccgcgaccctcggcaagcgccagggtgcc
gacattgcacgcgacaaaccgacctaccccgcactgctgggcctggacgcagccaagggc
tatgccctggaattacgcgatcaggcgctcgctgcactgagtcctttcgacgccgccgca
gagccgttgcgcgagctggcgcggtacatcgtcgagcgccgccactga
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