Pseudomonas avellanae: BKM03_04425
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Entry
BKM03_04425 CDS
T05369
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pavl03000
]
BKM03_04425
Transcription factors [BR:
pavl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BKM03_04425
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_34
Motif
Other DBs
NCBI-ProteinID:
AVB18606
UniProt:
A0AAD0GQC8
LinkDB
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Position
complement(860976..861896)
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AA seq
306 aa
AA seq
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MSTRRSDPLAQVSDFDIRLLRIFKSVVEAGGFSAAESVLGIGRSAISQQMSDLEQRLGLR
LCQRGRAGFSLTDEGREVYQSSLQLLSALESFRTEVNGLHQNLRGELNIGLTDNLVTLPH
MRITHALSRLKERGPGVYINIRMIAPAEVEQGVLDGGLHVGVVPQASALPGLEYHSLYSE
RSLLYCAVGHPLFYAENTTLDDQRLALQEAVAPTFRLPNDIQEQYKALTCTASASDREGI
AFLILTGRYIGYLPDHYANAWVQEGRLRALKPDAKFYDLNLVTVTRKGRRPHLVLEGFLE
ALAATR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccgccgctccgaccccttggcccaggtcagtgattttgacattcgcttgctg
cgcatcttcaagagcgtagtcgaggctggaggcttttcagccgcagaaagcgtgctgggc
ataggcaggtcggcgatcagccagcagatgagcgatctggaacaacgccttggtttgcga
ctgtgtcagcgcgggcgagcagggttttcactgaccgatgagggccgcgaggtttatcag
tcatcgctgcaactgctcagtgcgctggaaagctttcgcaccgaggtcaacggcctgcac
cagaatctgcgcggcgaactgaacattggcctgaccgataacctggtcaccctcccccac
atgcgcataacccatgcactgtcgcgcctcaaggaacgtgggccgggcgtgtacatcaac
atccgcatgattgcgcccgccgaggtcgagcaaggcgtactcgacggcggcctgcatgtt
ggtgtggtgccgcaggccagcgcgctgccggggctggaatatcattcgctgtacagcgag
cgctcgctgctttattgcgcggtgggtcatccgttgttctatgcagaaaacacaacgctc
gacgaccagcgtctcgcgctacaggaagccgttgctccaaccttccgcctgccgaacgat
attcaggagcaatacaaggcactgacgtgcaccgccagtgcctctgaccgggaaggcatc
gcgttcctcattctgaccggacgctacatcggctatctgccggatcattacgccaacgcc
tgggtgcaggaaggcaggttgcgcgcattgaaaccggacgcgaagttttacgatctcaat
ctggtcaccgtcacacgcaaaggccgacgccctcatttggtgctcgaaggctttctggaa
gcacttgctgctacccgatga
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