KEGG   Pseudomonas avellanae: BKM03_04540
Entry
BKM03_04540       CDS       T05369                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pavl  Pseudomonas avellanae
Pathway
pavl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pavl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BKM03_04540
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pavl02044]
    BKM03_04540
Secretion system [BR:pavl02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BKM03_04540
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF2345 DUF6484
Other DBs
NCBI-ProteinID: AVB18616
UniProt: A0AAD0DV32
LinkDB
Position
complement(891561..893627)
AA seq 688 aa
MLASAHQARFSLILDGIDHDFQVLSFSGHEAISQPFCFTLELVSERPSLDLESLLNRQAY
LQFAPDGGGIQGLIDRIAQGDSGRRLTRYSITLRPHLARLAHRTNQRIFQSLTVPQIIEQ
VFKDHGLLANAFRFHAGAPYAEREYCVQYDESDLHFIQRLCEEEGLHYHFEHSPTAHQLV
FGDDQTVFPKLGPVIYKQDTALLAEEPVITRFKLRLETRPESTARRDYHFEKPFLTMEGA
AAGNNSTELEDYDYPGRFTHRDRGTHLAQRALERHRHDYLLGDGHSDQPRLVSGHFLTLS
EHPNDDWNELWLLTEVRHEGRQPQVLEESVHEIQSPDNFHQGYRNTFLATPWKAIFRPPL
RHPKPRISSSQTAVVAGPEGKEIHCDEHGRVMVRFHWDRSGQSSCWLRVSSSWAGNGYGG
MVIPRIGMEVLVTFLDGDPDRPLISDCLYHAEHVPPYELPAHQTRSVFKTLSSPGGGGSN
ELRIEDRAGQEQIYVHAQRDWDQNVEHDQRIYVGHERHDRVEANSYSEFKAQEHRTVEAD
RLTEVRADDHLTVGGTRHIQLGDGLLVEAGKEIHLSAGNKIVIESGMEITVNVGGSFIKI
DASGVTVTGPLTRLNSGGQPATGTKAAPLLPGLMKQASNDGPGELLMQRLSGPGPIVELC
QKPKGGTPADCPLADCGCRKALLSGGQR
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgcttgcatcggcccaccaggctcgtttcagtctgatcctcgacggtatcgatcacgac
tttcaggtcttgtcgttcagcggccacgaagccatcagtcaacctttctgctttacgctg
gagctggtcagcgagcgcccgtcgctggatctggaaagtttgctgaatcgccaagcctat
ctgcaattcgcgcccgatggcggcggcattcaagggttgatcgatcgaattgcccaaggc
gactccgggcgacgtttgacccgttattcgatcacgctacgcccgcatctggcccggctt
gctcatcgcaccaatcagcgcatctttcagagcctgacggtgccgcagatcatcgagcag
gtgttcaaggaccacggcttgctggccaatgcctttcgcttccatgccggtgcgccttac
gccgaacgtgaatactgcgtgcaatacgacgaatctgatctgcacttcattcagcgtctg
tgcgaagaggaaggtctgcactatcacttcgagcacagcccgacggcgcatcaactggtg
ttcggcgatgaccagacggtgttcccgaagctggggcctgtgatctataaacaggacacc
gccctgctggccgaagagccggtgatcacgcgcttcaaactccggctggagactcgcccc
gagagtaccgctcgccgtgattaccatttcgagaagccgtttctgaccatggagggagcg
gcggctggcaacaacagcacagagcttgaagactacgattatccggggcggttcacgcac
cgggaccgtggcactcatctcgcgcagcgggcacttgaacgtcatcgccatgactacttg
ctgggcgatgggcacagcgatcagccgcgactggtcagcggccattttctgaccctgagc
gaacatcccaacgacgactggaatgagttgtggctgctgactgaagttcgccatgaaggc
cgtcaaccgcaagtgcttgaagagtccgtgcacgagatccagagccctgacaactttcat
cagggctaccgcaatacgttcttggctacgccctggaaagcaatctttcgcccgcccttg
cgtcaccccaagccacgaatatccagcagccagaccgccgtggtcgccggcccggagggt
aaggaaattcactgcgacgagcacgggcgggtcatggtgcggtttcattgggatcgttca
ggccaaagcagctgctggctgcgggtgtcgtcgagctgggcgggtaatggttatggcggc
atggtcatcccgcgaatcggcatggaagtgctggtgacttttcttgacggcgaccctgac
cggccgttgatcagcgactgcctgtatcacgccgagcacgttccgccctatgaactgccc
gcgcaccagacgcgcagcgtgttcaagaccctcagcagcccaggcggcgggggctccaat
gaattgcgcatcgaggaccgagccgggcaggagcagatctatgttcatgctcaacgcgac
tgggatcagaacgtcgagcacgaccagcgcatctacgtcggccatgagcgtcacgaccgg
gtcgaagcgaacagttacagcgagttcaaggctcaggaacaccgtactgtcgaggctgac
cggctgacggaagtcagagcggatgatcatctgaccgtgggtgggactcggcatattcag
ctgggtgatggcctgctggtagaggccggaaaggaaattcacctgagcgccgggaataaa
atagtgatcgagtcgggaatggaaatcaccgtcaacgtcggcggctcttttatcaagatc
gatgccagcggcgtgaccgtgacaggcccgctgacaaggctcaattcaggcggccagccg
gcaacaggtacgaaggcagcgcctctgttgccggggctgatgaaacaggccagtaacgac
ggaccgggggagttgctgatgcagcgcctgagcgggcctgggccgatagtggagctttgt
cagaaacccaagggcggaacgcctgcggactgcccacttgccgattgcggctgtcgcaaa
gccttgctgtcgggtggccagagatga

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