Pseudomonas avellanae: BKM03_04780
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Entry
BKM03_04780 CDS
T05369
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pavl
Pseudomonas avellanae
Pathway
pavl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BKM03_04780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pavl02022
]
BKM03_04780
02035 Bacterial motility proteins [BR:
pavl02035
]
BKM03_04780
Two-component system [BR:
pavl02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
BKM03_04780
Bacterial motility proteins [BR:
pavl02035
]
Pilus system
Twitching motility proteins
BKM03_04780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
Mg_chelatase
AAA_5
HTH_50
HTH_30
Pre_tape_measure
AAA_22
AAA_19
AAA_16
AAA
Motif
Other DBs
NCBI-ProteinID:
AVB18661
UniProt:
A0AAD0DV62
LinkDB
All DBs
Position
complement(942671..944011)
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AA seq
446 aa
AA seq
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MSQRQKILIVDDEPDIRELLEITLGRMKLDTRSARNVAEAHDWLAREPFDMCLTDMRLPD
GNGLELVQHIQHGYPHVPVAMITAHGNLDTAIHALKAGAFDFVTKPVDLNRLRELVNSAL
SLPCATQPVRSIDSRLLGDSPPMRTLRNQIGKLARSQAPIYISGESGSGKELVARLIHEQ
GPRINKPFVPVNCGAIPSELMESEFFGHRKGSFSGAHEDKPGLFQAAHNGTLFLDEVADL
PLAMQVKLLRAIQEKSIRSVGGQQEQVVDVRILCATHKDLNVEVAAGRFRQDLYYRLNVI
ELRVPSLRERREDIDQIAASVLRRLAGNSTQPVVRLHAQALETLKSYRFPGNVRELENML
ERAYTLCENDEIHASDLRLAESASPQAQQGANLADIDNLEDYLESIERKLILQALEETRW
NRTAAAERLSLSFRSLRYRLKKLGLD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacggcaaaagatcctgatagtcgatgatgagccggatattcgcgaacttctg
gagatcaccctcgggcgcatgaagctcgacacccgcagcgctcgcaacgttgccgaggcc
catgactggctggcccgagagccgttcgatatgtgcctgaccgacatgcgcctgcccgat
ggcaacggcctggaactggtgcagcacatccagcacggctacccccatgtgccggtggcg
atgatcaccgcccacggcaatctggacacggcgattcatgcgttgaaagccggagccttc
gatttcgtgaccaaaccggtggacctcaaccggctccgcgaactggtcaatagtgcgctg
agcctgccctgcgccacccaaccggtacgcagcatcgacagccggctgctgggcgactca
ccgccgatgcgtaccttgcgtaaccagatcggcaaactggcgcgcagccaggcgcccatt
tacatcagcggcgagtcgggcagcggcaaagagctggtagcccggctgatccacgagcaa
gggccgcgcatcaacaaacccttcgtgccggtcaactgcggggcgattccctccgaattg
atggagagcgaattcttcggccatcgcaaaggcagcttcagcggtgcccacgaagacaag
ccgggcctattccaggcggcgcacaacgggacgctgttccttgatgaggtcgccgatctg
ccgctggccatgcaggtaaaactgctgcgcgcgatccaggaaaagtccatccgcagcgtc
ggcggtcagcaggagcaggtcgtggacgtgcgtattctgtgcgccacccacaaggacctg
aatgtcgaagtcgctgcgggccgtttccgtcaagacctgtattaccggcttaacgtgatc
gaactgcgcgtgccttcattgcgcgagcggcgtgaagacatcgatcagattgcagccagc
gttttgcggcgacttgcaggcaacagcactcagcccgttgtgcgcttgcatgcgcaggct
ctggaaacactgaaaagttatcgattccctggaaacgtgcgcgaactggaaaacatgctg
gagcgcgcttacaccctctgtgaaaacgatgaaatccacgccagcgacctgcgcctcgcc
gagtccgccagccctcaggcacaacagggtgcgaacctggctgatatcgataacctggaa
gactacctggaaagcatcgaacgcaaactcatcctccaggccctggaagaaacccgttgg
aaccgtactgctgcggccgaacggctcagtttgtcattcagatcgttgcgctatcggttg
aagaagctggggctggattga
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