Pseudomonas avellanae: BKM03_05620
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Entry
BKM03_05620 CDS
T05369
Name
(GenBank) catabolite repressor/activator
KO
K03435
LacI family transcriptional regulator, fructose operon transcriptional repressor
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pavl03000
]
BKM03_05620
Transcription factors [BR:
pavl03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BKM03_05620
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
LacI
Peripla_BP_4
Peripla_BP_3
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AVB18778
UniProt:
A0A6H3CTE2
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Position
complement(1088044..1089039)
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AA seq
331 aa
AA seq
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MKLSDIARLAGVSVTTASYVINGKAEQQRISPATVERVKAVVEQYDFRPNPQAAGLRSRH
SKTLGFILPDLENPSYARIAKLLEQGARSLGYQLLIASSDDDPASELQLLQLFRARRCDA
LLVASCLPPSDASYRDLQLKGMPIIAIDREMDPNFFCSVVSDDHDASLQLTRSLLQTQPR
HIALIGARPELSISRARAAGFEHALDGFAGTTIVEHGEAFSRQCGQRLMSEMLQRQGHFP
DALITTSYVLLQGVFDVLQRQSLNTTSLHLGTFGDTQLLDFLPLPVNAMAQQHQLIADKA
LQLALAAIEKDDYQPGVHAIVRAFKQRIHGV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgagcgatattgcacgtctggcaggtgtttctgtcaccaccgccagctatgtc
atcaacggcaaggccgaacaacaacgcatcagccccgcaacggtcgagcgcgtcaaggcg
gtggtcgagcaatacgacttccggcccaaccctcaagcagcgggcctgcgcagtcgtcac
agcaaaacgctgggcttcatcctgccggatctggaaaaccccagctatgcgcgtatcgcc
aaactgctagagcagggcgcgcgcagccttggctatcaattgctgattgccagctccgat
gatgacccggccagtgaattgcaactgttacagctgtttcgcgcacgccgctgtgacgcc
ctgctggtcgccagttgcctgccgcccagcgacgcgagctatcgcgacttgcagctcaaa
ggcatgccgatcatcgccatcgaccgggaaatggaccctaacttcttctgctcggtggtc
agcgacgaccacgatgccagcctgcaactgacgcgcagcctgctgcagacccagccaagg
cacatcgccctgatcggtgcgcgccccgaactgagcatcagccgggcccgggcagcaggc
ttcgaacatgctctggacggctttgccggcaccaccattgtcgaacacggcgaagcattc
agccgccagtgcgggcagcgcctgatgtccgagatgctgcaacgccaggggcattttcca
gacgcactgatcaccacttcctatgtgctgctgcaaggcgtgttcgacgtgctgcaacgc
cagtcacttaacacgacctcattgcacctgggcacgttcggtgacacgcaattgctggat
ttcctgccgttgcccgtcaatgcgatggcccagcaacatcagctgatcgctgacaaagcg
ctgcaactggccttggccgccatcgagaaggacgattatcaaccgggcgtgcatgccatc
gtgcgcgccttcaagcaacgcattcacggggtgtga
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