Pseudomonas avellanae: BKM03_08040
Help
Entry
BKM03_08040 CDS
T05369
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BKM03_08040
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pavl01007
]
BKM03_08040
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pavl03016
]
BKM03_08040
Enzymes [BR:
pavl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
BKM03_08040
Amino acid related enzymes [BR:
pavl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
BKM03_08040
Transfer RNA biogenesis [BR:
pavl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BKM03_08040
Prokaryotic type
BKM03_08040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
AVB19204
UniProt:
A0A261WJY2
LinkDB
All DBs
Position
1597686..1598975
Genome browser
AA seq
429 aa
AA seq
DB search
MSKSLQAIRGMNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPIVEFTDLFKRSIGEVT
DIVEKEMYTFADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHERPQK
GRYRQFHQIGVEVFNLDGPDIDAELIVMTWRLWGMLGIRNAVKLELNSLGTSEARARYRD
ALVEFLSAHLDQLDEDSQRRLKTNPLRVLDTKHPETQAVLVDAPKLADYLDDESRIHFEG
LKARLDAAGIPYVINPKLVRGLDYYSKTVFEWVTDQLGAQGTVCAGGRYDGLVEQMGGKP
TAGVGFAMGIERLVLLLETLEQVPEEIGRQVDVYLCAFGEAAELAALALTEQVRDQLPNL
RLQVNAGAGSFKSQFKKADKSGALYALILGEEELAAKIIGVKPLRGQGEQQNIAWDALSE
HLASCVVQG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaagtctctacaagccattcgtggcatgaacgacatcctgcccgagcagacgcca
ctgtggcgtcactttgaaggcactgtttcgcgtttgctggataactacggttaccggcag
attcgtatgcctatcgtcgaatttaccgacctgttcaagcgctctatcggcgaagtgacc
gatatcgtcgaaaaagagatgtacaccttcgccgaccgtaacggcgactctctgaccctg
cgcccggaaggcactgccgcctgtgtgcgtgcggttcttgaacacggtattaccggtggc
ggtcaggttcagaaactgtggtacatcgggccgatgtttcgccacgagcgtccacagaaa
ggccgctatcgccagtttcaccagattggtgtcgaggttttcaatcttgacggtccggac
atcgatgccgaactgatcgtcatgacctggcgcctgtggggcatgctgggcattcgcaat
gcggtcaagcttgagctgaacagcctgggcaccagcgaggcgcgagcgcgttaccgcgat
gcgctggtcgagtttctttcggcccatcttgatcaactggatgaagacagccagcgtcgc
ctgaaaaccaatccgctgcgcgtactggacaccaagcaccctgaaacccaggctgtgctg
gtcgatgcgcccaagctggcggattatctggatgacgagtcgcgcatccacttcgaaggc
ctcaaggcccgtctggacgctgctggcattccttatgtcatcaaccccaagctggtacgc
gggctggattactacagcaagaccgttttcgaatgggtcaccgatcaactgggtgcccaa
ggtacggtctgcgcgggcggtcgttacgacggtctggtcgagcagatgggcggcaagccc
actgccggcgtcggttttgcaatgggcatcgagcgtctggtattgctgcttgaaaccctt
gaacaggttcccgaagaaattggccgtcaggtcgatgtctacctgtgtgccttcggcgaa
gcggccgaactggctgcgctggcgctgaccgaacaggtccgtgatcagttgcccaacctg
cgcctgcaggtcaacgcaggtgctggcagcttcaagagccagttcaagaaggctgacaag
agcggcgcgctttacgcgctgatcctcggcgaagaagaacttgctgcaaagatcataggc
gtcaaacccctgcgtggtcagggtgaacaacaaaatattgcctgggacgctctgtcagag
cacctggcctcctgcgttgtgcagggttga
DBGET
integrated database retrieval system
