Pseudomonas avellanae: BKM03_08670
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Entry
BKM03_08670 CDS
T05369
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl03030
DNA replication
pavl03430
Mismatch repair
pavl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKM03_08670
03430 Mismatch repair
BKM03_08670
03440 Homologous recombination
BKM03_08670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pavl03032
]
BKM03_08670
03400 DNA repair and recombination proteins [BR:
pavl03400
]
BKM03_08670
Enzymes [BR:
pavl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKM03_08670
DNA replication proteins [BR:
pavl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BKM03_08670
DNA repair and recombination proteins [BR:
pavl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BKM03_08670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AVB19319
UniProt:
A0AAD0DTS8
LinkDB
All DBs
Position
1736204..1739725
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRVKPLIKSLTSMNMPAVAVTDQNNMCSLVKFYKAAQGSG
IKPICGVDLWLAGRDEDAALSRISLLAMNAQGYRNLTELISRGFIEGQRNGQIVIQRQWV
AQASEGVIALSAAKEGEIGMALLGGNPAEADELLREWLAVFPDRFYIEVQRTNRANDEEH
LHAAVALAERHGAPLVATNDVRFINQTDFEAHETRVCIGEGRALDDPRRSHNYSDQQYLK
SPEEMAELFSDLPEALENTVEIAKRCNIDVKLGTHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLAVLMPRDTTEDYETKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFLKVDEEAAEIWEMARKLEGIVRNVGKHAGGVVIAPTKLTDFSPIYCDEAGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRERAKVDEAPLDIAFIPLDDLPTYQ
LLQRAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELSYPHVDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIDGCKSNNIEPDLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNTSEFKFTVSDDGRILYGLGAI
KGVGEGPVEAITDARQKGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFELEP
KAYQASIDRNRSVLLAALEEAIQAAEQTARSHDSGHSDLFGGLFVEADADVYANHRKTRE
LSLKDRLRGEKETLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGLIIALRVM
KNKKGDKMGFITLDDRSARIEASLFAEAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
AKRVMSIEDARTNLAESLRVTVHADALKGDRLRWLGDLCKRHRGACPITVDYTGRDARAL
LQLGEAWRIDPADSLIQALRDQFGRENVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttctttcgttcatctacgcctgcacaccgagtactcgctggttgacggtctg
gtccgggtcaaaccgttgatcaagtcgctgaccagcatgaacatgcctgccgtggcggtg
accgatcagaacaacatgtgttcgctggtcaagttctacaaggccgctcagggctccggg
atcaagccgatctgtggcgtcgatctgtggctggccggccgcgacgaagacgccgcgctc
agtcgcatcagcctgctggccatgaacgcccagggctatcgcaacctgaccgagctgatt
tcccgtggtttcatcgagggtcagcgcaacggccagatcgtcatccagcgccagtgggtc
gcgcaggccagcgagggcgtgattgctctgtccgcagccaaggaaggcgagatcggcatg
gcgttgctcggtggcaaccccgcagaagcggacgagttgctgcgcgaatggctggccgtg
tttccggaccgcttctacatcgaagtacagcgtaccaatcgcgccaatgatgaagagcat
ctgcacgccgcggttgccctggccgagcgccacggtgcaccgctggtcgcgaccaacgat
gtacgcttcatcaatcagactgatttcgaggcgcacgagacccgcgtctgcatcggcgaa
ggccgtgcgctggacgatccgcggcgctcgcacaactacagcgatcagcagtacctgaaa
agcccggaagaaatggccgagctgttcagcgatctgcccgaggcgctggaaaacaccgtc
gagattgccaagcgttgcaatatcgacgtcaagctgggcactcacttcctgcccaacttc
ccgattcccgatggcatgaccatcgatgagtatttccgcaaggtgtccttcgacggtctg
gaggagcggcttgccgttctgatgcccagggacaccactgaagattacgaaaccaaacgt
caggtgtatgtcgatcggctgaatttcgagctggatatcatcatccagatggggttcccc
ggttacttcctgatcgttatggacttcattcagtgggccaagagcaacggcgtcccggtg
gggcctggccgtggttcgggtgccgggtcgctggttgcttatgtgcagaagatcaccgac
cttgatccactggaatacgacctgctgttcgagcgcttcctgaacccggaacgggtttcc
atgcccgacttcgacgtcgacttctgcatggacggtcgtgatcgggtcatcgaatacgtg
gccgaaaagtacgggcgcaatgcggtcagccagatcatcacgttcggttccatggcggcc
aaggcggtggtgcgcgacgtggcgcgggtgcagggcaagtcctacgggctggcggatcgt
ctgtcgaagatgatcccctttgaagtcggcatgaccctcgaaaaggcgtacgagcaggaa
gagattcttcgcgactttctcaaggtcgatgaagaggccgctgaaatctgggaaatggcg
cgcaagcttgagggcattgtgcgtaacgtgggcaagcacgccgggggcgtggtaatcgcc
ccgaccaagctgaccgacttctcgccaatctattgcgacgaggccggtgacggtctggta
acccagttcgacaaggacgatgtcgaggcagcggggctggtgaagttcgacttcctcggt
ctgcgcaccctgaccatcatcgactgggcgctcaagaccatcaaccgcgagcgcgccaag
gtcgacgaagcgccgctggacatcgcgtttatcccgctcgacgacctgccgacctatcag
ttgttgcagcgcgccgaaaccacggcggtgttccagcttgagtcgcgcggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagaccttatcgcactggtggcgttgttc
cgtcccggcccgctgcaatcgggcatggtagacgacttcatcaaccgcaagcacggtcgc
gccgaattgtcctacccgcacgtcgactaccagtacgaaggcctcaagccagtactggcg
ccgacctacggcatcattctgtatcaggaacaggtgatgcagattgctcaggtcatggcc
ggttacaccctcggcggtgcggacatgctgcgccgtgcgatgggcaagaaaaagcccgag
gaaatggccaagcagcgcggcggtttcattgatggctgcaagtcgaacaacatcgagccg
gatctggccggtaacatttttgacctggtggaaaaattcgccggttacggtttcaacaag
tctcactcggcagcctatgggctggtgtcgtaccagacggcctggctgaaaacccactac
ccggcgccgttcatggccgccgtgttgtcggcggacatgcacaacaccgacaaggtcgtg
accttgatcgaagaggtgcgcacgatgaagctgcgcctcgacgcaccggatgtgaacacc
tcggagttcaagttcacggtaagcgacgacggccgcattctctacgggctgggcgcaatc
aagggtgtgggtgaggggccggtcgaagccattaccgatgcgcgtcaaaagggcccgttc
aaggacctgtttgatttctgtgcgcgtgtcgacctcaaaagaatcaacaaacgaacgctg
gacggcctgattcgcagtggcgcgctggaccgtttgggcccgtacttcgagctggagccc
aaggcctatcaggccagtatcgaccgtaaccgttcggtattgctggcagcgctggaagag
gccattcaagccgctgagcaaaccgcccgcagtcacgacagcggccattcggacctgttt
ggcggtctgttcgtcgaagcggatgccgacgtttacgccaatcatcgcaagacccgcgag
ctgagcctcaaggatcgtctgcgcggtgagaaggaaaccttggggctttacctgaccggg
cacccgatcgatgagtacgaaggcgagatccgccgctttgcgcggcagcgaatcatcgac
ctcaagcccgccagggacactcagacggttgcaggcctgatcattgccttgcgcgtgatg
aaaaacaagaagggcgacaagatggggttcatcaccctggacgatcgctcggcgcgtatt
gaagcgtctttgttcgccgaagcgtttcactcggcccagtcactgttgcagaccgatgct
atggtagtggtcgagggcgaagtcagtaacgatgacttttccggtggtctgcggttgcgc
gccaaacgggtgatgagcatcgaagatgcgcgcaccaacctggccgagagcctgcgcgtg
acggtgcatgccgacgcgctcaagggcgatcgactgcgctggctcggcgatttatgcaag
cgccatcgcggtgcttgtccgatcaccgtggattacaccgggcgggacgcccgggcactg
ctgcaattgggagaagcctggcgtattgatcccgcagacagcttgattcaagctctgcgt
gaccagttcggacgtgagaacgtctttctccagtatcgttga
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integrated database retrieval system
