Pseudomonas avellanae: BKM03_08760
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Entry
BKM03_08760 CDS
T05369
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pavl
Pseudomonas avellanae
Pathway
pavl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BKM03_08760 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pavl03400
]
BKM03_08760 (mutS)
DNA repair and recombination proteins [BR:
pavl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BKM03_08760 (mutS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Gp41_Mu
Motif
Other DBs
NCBI-ProteinID:
AVB19336
UniProt:
A0AAD0DWM1
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Position
complement(1756949..1759528)
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AA seq
859 aa
AA seq
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MNKAISDLSAHTPMMQQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARG
QSAGQSIPMCGIPYHAAEGYLAKLVKLGESVVICEQIGDPATSKGPVDRQVVRIITPGTI
SDEALLDERRDNLIAAVLGDERLFGLAVLDITSGNFSVLEIKGWENLLAELERINPVELL
IPDDWPQGLPAEKRRGARRRAPWDFERDSAHKSLCQQFSTQDLKGFGCETLTLAIGAAGC
LLGYAKETQRTALPHLRSLRHERLDDTVILDAASRRNLELDTNLSGGRDNTLQSVMDRCQ
TAMGTRLLTRWLNRPLRDLSILQARQTSITCFLERYRFENLQPQLKEIGDIERILARIGL
RNARPRDLARLRDALSALPELQQAMNDLDAPHLQQLAQTASTYPELADLLQRAINDNPPA
VIRDGGVLKTGYDAELDDLQSLSENAGQFLIDLEAREKARTGLSHLKVGYNRVHGYFIEL
PSKQAEQAPADYIRRQTLKGAERFITPELKEFEDKALSAKSRALAREKMLYETLLEDLIG
HLAPLQDTAAALAELDVLSNLAERALNLDLNCPRFVAEPCMRIEQGRHPVVEQVLSTPFV
ANDLALDDSTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRI
GSSDDLAGGRSTFMVEMSETANILHNATDKSLVLMDEVGRGTSTFDGLSLAWAAAECLAQ
LRAYTLFATHYFELTVLPESEPLVNNVHLNATEHNERIVFLHRVLPGPASQSYGLAVAQL
AGVPGKVITRAKEHLQRLETTSLPHEQPRAKPGKPAIPQQSDMFASLPHPVLDELSKIKV
DDLTPRQALDLLYTLQTRL
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaatttccgacctctccgcacatacgccgatgatgcagcagtactggaaa
ctcaaaaaccagcacctggatcaactgatgttttatcgcatgggcgatttctatgaaatc
ttctacgaagacgccaagaaagccgccaagctgctggacatcaccctgaccgcccgcggt
cagtcggccgggcaaagcattcccatgtgcgggattccctatcacgcggccgagggctac
ctggccaagctggtgaagctgggcgagtcggtggtcatctgcgaacagatcggcgacccg
gccaccagcaaaggcccggtggatcgtcaggtcgtacggatcatcacgcccggcaccatc
agcgatgaagccttgctggatgagcgtcgagacaacctgatcgctgccgtcctcggtgac
gaacgcctgttcggcctggctgtactggacatcaccagcggcaacttcagcgtgctggag
atcaaaggctgggagaacctgctggccgagcttgagcgcatcaatccggtcgagctgttg
atccccgatgactggccgcaaggtttgcccgctgaaaaacgtcgcggtgcccggcgtcgc
gcgccgtgggatttcgagcgtgattcggcccataaaagtctgtgtcagcaattttcaacc
caagacctgaaaggctttggctgcgaaaccctgacattggccattggtgctgccggctgt
ctgctcggttacgcgaaagaaacccaacgcactgccctgccgcatttgcgcagcctgcgt
cacgagcgcctcgacgacacagtgatccttgatgccgccagccgtcgcaacctggagctg
gacaccaatctgtccggtggccgcgataacacgctgcaatcggtcatggaccgctgccag
accgcgatgggcacgcgactgctgacccgctggctgaatcgcccgctgcgcgacctgagc
attcttcaggctcgtcagacgtccatcacttgctttctggaacgctatcgcttcgagaac
ctgcaaccgcagctcaaggaaatcggcgacatcgaacggattctggcgcggatcggtctg
cgcaatgcgcgaccacgcgacctggcccgcctgcgcgatgcgctgagcgctttgcctgag
ctgcaacaggcgatgaatgacctggatgcgccgcacctgcaacagctcgcacagaccgcc
agcacctacccggaactggctgacctgctgcaacgcgcgatcaacgataacccgcctgcc
gtgattcgtgacggcggcgtgctcaagaccggctatgacgccgagctggacgacctgcaa
tcgctgagcgaaaacgccggtcagttcctgattgatctggaagcccgggaaaaagcccgg
accggcctgagccatctgaaagtcggctacaaccgcgtgcacggctacttcatcgagctg
ccgagcaaacaggccgaacaggcgcccgccgattacattcgccgccagaccctcaagggt
gccgaacgctttattacgccggaactcaaagagttcgaggacaaggcgctgtcagcaaaa
agtcgcgcgctggctcgtgagaaaatgctttacgagacgttgctcgaagacctgatcggc
caccttgcgccgctgcaggacacagcggctgcactggccgagctggacgtactgagcaac
cttgcagaacgcgcgctgaacctggacctcaactgcccgcgcttcgtcgccgagccgtgc
atgcgcatcgaacaaggccgccaccctgtggtcgagcaggtgctgagtacgcctttcgtg
gccaacgatctggcactggacgacagcacacgcatgctgatcatcaccggcccgaacatg
ggcggtaaatccacttacatgcgccagacggcgctgatcgtgctgctggcccatatcggc
agcttcgtgcccgccgccagctgcgagctgtcgctggttgaccggatcttcacccgcatc
ggctccagtgacgatctggccggcggacgctcgacgttcatggtggaaatgagcgaaaca
gccaacatcctgcacaatgccaccgataaaagcctggtgctgatggatgaagtcgggcgc
ggcaccagcaccttcgacggtctgtcgctggcctgggcggcggcagaatgcctggcacaa
ctgcgtgcctacacgctgttcgcgacgcactatttcgagctgacggttttgccggaaagc
gagccgctggtgaacaacgtgcacctcaatgccaccgagcataacgagcgaatcgtgttc
ctgcacagagtgctgccggggccggccagccagagctacggcctggcggttgcgcagctt
gcgggcgttccggggaaagtcatcacgcgcgccaaagagcacttgcagcgcctggaaacc
accagcctgccgcacgaacaaccgcgcgcaaaacccggcaaacccgcgatcccgcaacag
agcgatatgttcgcaagcctgccgcacccggtactcgacgaactgtcgaagatcaaggtc
gacgacctgaccccgcgacaagcgctggatttgctctatacattgcaaactcgcctgtga
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