Pseudomonas avellanae: BKM03_08840
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Entry
BKM03_08840 CDS
T05369
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pavl03009
]
BKM03_08840
Enzymes [BR:
pavl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BKM03_08840
Ribosome biogenesis [BR:
pavl03009
]
Prokaryotic type
ribosomal protein modification factors
BKM03_08840
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
AVB19351
UniProt:
A0A261WJX4
LinkDB
All DBs
Position
complement(1770804..1772147)
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AA seq
447 aa
AA seq
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MSTVTTPSAPKVGFVSLGCPKALVDSERILTQLRMEGYEVVATYEDADVVVVNTCGFIDT
AKAESLEVIGEAIKENGKVIVTGCMGVDASVIRAVHPSVLSVTGPQQYEQVVNAVHDVVP
PRKDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AKRLVKSGVKELLVISQDTSAYGVDVKYRTGFWDGQPVKTRMTELCQALGSMGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKILKLMKRPAFEDKTLARIKNWREQCPD
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDAAIVPDDVK
QDRWDRFMAHQQAISAARLQMKIGKEIEVLIDEVDDRGAVGRCFFDAPEIDGNVFIGLED
GSTVQPGDKIMCRVTDADEYDLWAEML
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgtcaccacgccatccgcccccaaggtcggattcgtttctctgggttgcccc
aaggcgctcgttgactccgaacgcatcctgacccaactgcgcatggaaggttacgaagtc
gttgcgacctacgaggacgccgacgtggttgtggtcaatacctgcggcttcatcgacacg
gccaaggccgagtcgctggaagtaatcggcgaagcgatcaaggaaaacggcaaggtcatc
gtcaccggctgcatgggcgtcgatgcaagcgtgattcgcgccgtacacccgagtgtgctg
tcggtgaccggcccgcagcagtacgagcaggtggtcaatgccgtgcacgatgtcgtgccg
ccacgcaaggatcacaacccgctgatcgatctggtgccgccgcaaggcgtcaagctgacc
ccgcgccattacgcgtacctgaagatttccgaaggctgcaaccacagttgcagcttctgc
atcatcccgtcgatgcgcggcaagctggtcagccgtccggttggcgatgtgctggacgag
gccaagcgcctggtcaaatccggcgtgaaggaattgctggtgatttcccaagacaccagc
gcctacggcgtcgatgtcaaataccgcaccggtttctgggacggtcagccggtcaagacc
cgcatgaccgagctgtgtcaggcgctgggctcgatgggggtatgggttcgtttgcactat
gtatacccgtacccgcacgtcgatgagctgatcccgctgatggcggcaggcaagatcctg
ccgtacctcgatatccccttccagcacgccagcccgaaaatcctcaagctgatgaagcgc
ccggccttcgaagacaagaccctggcgcgtatcaagaactggcgcgagcagtgccctgat
ctgatcatccgttcgacgttcatcgtcggcttccccggtgaaaccgaagaagatttccag
tacctgctggactggctgaccgaagctcagctggaccgcgtcggctgcttccagtactcg
ccggtagaaggtgctcctgccaacctgctggacgccgccattgtgccggatgacgtcaaa
caggatcgctgggatcgcttcatggctcatcaacaggccatcagcgccgcccgcctgcag
atgaagatcggcaaggaaatcgaagtgctgatcgacgaagtcgatgatcgcggcgcggta
ggccgttgtttcttcgatgcgccggaaatcgatggcaacgtgttcatcggtcttgaagac
ggcagcaccgtccagccgggcgacaagatcatgtgtcgcgtcaccgacgccgacgaatat
gacctgtgggccgagatgctctga
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