Pseudomonas avellanae: BKM03_08905
Help
Entry
BKM03_08905 CDS
T05369
Name
(GenBank) outer membrane porin, OprD family
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl01501
beta-Lactam resistance
pavl02020
Two-component system
Module
pavl_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BKM03_08905
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BKM03_08905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pavl02000
]
BKM03_08905
01504 Antimicrobial resistance genes [BR:
pavl01504
]
BKM03_08905
Transporters [BR:
pavl02000
]
Other transporters
Pores ion channels [TC:
1
]
BKM03_08905
Antimicrobial resistance genes [BR:
pavl01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
BKM03_08905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AVB19360
UniProt:
A0A261WLX7
LinkDB
All DBs
Position
complement(1785491..1786837)
Genome browser
AA seq
448 aa
AA seq
DB search
MRVMKWSAIALAVTAASTQLATAAPFVSDQAEAKGFVEGSTLDLKLRNYYFNRDKKNNPA
PGGRSDKDWTQGIWANFSTGYTQGTIGVAAEAFGYGALRLWGLDKYSGSGNLVTDANGDN
EATQGKFGGAVKFRVSKTELKVGDMQPTSPVFAVGGSRILPQTASGLSLQSSEIAGLDLE
AGHFYSGTSQDDTSHNGSIWATYANGFSGLKANSADFLGGKYAITDGLGVAFYAAKLEDI
WDQYYGNVNYALPLGNDQSLAFDVNLYRTLDEGSAQAGSINNTTYSASAAYSFLAAHTVT
VAYQKVDGDTPFDYIGIGDNNRGGDSIFLANSVQYSDFNGPGEKSWQIRYDLNMTPYGVP
GLSFMTRYLNGDNIDGTKVDASSLYANMYGADGKHHETNVEAKYVVQAGPAKDLSFRMRQ
AWHRGNTAQADGDVNEFRLIVDYPISIL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgatgaagtggagcgcaatcgcactggccgttacggcagccagcacccaactg
gcaacagcggcacctttcgtcagcgatcaggctgaggccaagggtttcgtcgaaggcagc
acgcttgacctgaagttgcgcaactattatttcaaccgtgacaaaaagaacaatcccgcc
ccgggcggtcgtagcgacaaagactggactcagggcatctgggccaatttcagcactggc
tacacccaaggtactatcggtgtcgccgcagaggcattcggttacggagcgctgagactc
tggggtctggacaaatattcgggctcgggcaacctggttaccgatgccaatggcgacaac
gaagcaacacaaggtaaatttggcggtgctgtgaaattccgcgtttcgaagacagagctg
aaagtgggcgacatgcagccgaccagccctgtattcgcagttggcggttcgcgcatactg
cctcagacggctagcggcctgagcctgcagagcagtgaaattgccggtcttgaccttgaa
gctggacatttctattcgggcacaagccaggatgacaccagccataacggtagcatctgg
gcaacctacgccaatggttttagcgggctgaaagccaatagtgcggacttcctgggcggc
aaatacgccattaccgacggcctgggcgtagctttttatgcagccaagctcgaagatatc
tgggaccagtactacggtaatgtgaactacgcgctgcctctgggcaacgaccagtccttg
gcgtttgacgtcaatctttaccgcacacttgacgagggcagcgcccaagctggctcaatc
aacaacactacgtactccgcttcagcagcctattccttcctggcagcgcacaccgttact
gtcgcttatcagaaggtggacggcgacactccgttcgactacatcggcatcggcgacaat
aaccgtggtggcgactcgatcttcctggctaactccgttcagtactctgacttcaacggc
ccaggcgagaaatcgtggcaaattcgctacgacctgaacatgaccccttatggcgttcct
ggcctgagcttcatgactcgctatctcaatggcgacaacatcgacggcaccaaagtggat
gcttccagcctttacgccaacatgtacggcgccgacggcaagcatcacgaaaccaacgtt
gaagccaaatacgtcgttcaggccggccctgccaaagacctgtccttccgtatgcgacaa
gcgtggcaccgtggcaacaccgctcaagctgacggcgacgtcaacgagttccgcctgatt
gtcgactacccgatctcgatcctgtaa
DBGET
integrated database retrieval system
