Pseudomonas avellanae: BKM03_08965
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Entry
BKM03_08965 CDS
T05369
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BKM03_08965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pavl03400
]
BKM03_08965
Enzymes [BR:
pavl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKM03_08965
DNA repair and recombination proteins [BR:
pavl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BKM03_08965
RecFOR pathway proteins
BKM03_08965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_22
AAA_3
AAA_14
nSTAND3
AAA_17
AAA_16
RNA_helicase
AAA_28
Rad17
ABC_tran
AAA_18
NTPase_1
NB-ARC
TsaE
AAA_24
Sigma54_activ_2
RsgA_GTPase
NACHT
Motif
Other DBs
NCBI-ProteinID:
AVB19370
UniProt:
A0AAD0GN02
LinkDB
All DBs
Position
1794992..1796053
Genome browser
AA seq
353 aa
AA seq
DB search
MIDADRLITAVGGRDRDEQLDRAIRPLSLADYIGQPTVREQMELFIQAARGRNEALDHTL
IFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAAILTNLEPNDVLFIDEIHRLS
PIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQ
RLEFYNIADLSTIVARSAGILGLVIEPEGAFEIARRARGTPRIANRLLRRVRDFAQVRGN
GQITRQTADKALNLLDVDEHGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIED
VLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPARMGEMPVAGEFVDDAADL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgatagatgccgaccgcctgataaccgccgttggcggccgtgatcgtgatgagcagctg
gatcgtgcgattcgcccgctcagccttgcggactacatcggccagcccaccgtgcgcgag
cagatggagctgttcatccaggctgcccgaggccgcaacgaagcgctggaccacacgctg
atcttcggcccgcccggtctgggcaagacgaccctggccaatatcatcgcccaggaaatg
ggcgtgtcgatcaagagcacctcgggcccggtgctggagcgacccggtgatctggcggca
atcctgaccaatcttgaaccgaacgatgtgctgttcatcgacgagattcatcggttgtca
ccgattgtcgaggaagtgctgtacccggcgatggaagacttccagctcgacatcatgatc
ggcgaaggccctgcggcgcgttcaatcaagctcgatctgccgccgtttactctggtgggc
gcgaccacccgcgcgggcatgctgaccaacccgctgcgcgaccgcttcgggatcgtgcag
cggctggagttctacaatattgccgacctttcgacaatcgtggcgcgttcggcaggcatt
ctggggctggtcatcgagcccgaaggggcgttcgagatcgccaggcgcgcccggggtacg
ccgcgtatagccaaccgtttgctgcgccgcgtgcgggacttcgcccaggtgcgtggcaat
ggtcagatcacccggcagacagccgacaaggcgcttaacctgctggatgtcgacgagcac
ggctttgatcatcaggacaggcgtctgctgctgaccatgatcgagaagtttgacggcggg
cctgtcggtgtcgatagccttgcggccgcgatcagtgaagagcgtcacacaattgaagac
gtactggagccctatttgatccagcaaggctatatcatgcgcacacctcgcggacgcgtg
gtcacccgtcatgcgtatctgcatttcgggctgaacattccggcaaggatgggcgagatg
ccggtcgcaggtgaatttgtcgacgatgccgcggatttatag
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integrated database retrieval system
