Pseudomonas avellanae: BKM03_09925
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Entry
BKM03_09925 CDS
T05369
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pavl03016
]
BKM03_09925
Enzymes [BR:
pavl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BKM03_09925
Transfer RNA biogenesis [BR:
pavl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BKM03_09925
Prokaryotic type
BKM03_09925
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AVB19535
UniProt:
A0AAD0GN59
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All DBs
Position
1980879..1981703
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AA seq
274 aa
AA seq
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MAAEGFSRIALGVEYKGSRYCGWQRQASGVLTVQETLEDALSKVAASPVSLMCAGRTDAG
VHACGQVVHFDTQAERSLKAWVMGANINLPHDVSVSWAKVMPATFHARFKAIARRYRYVI
YNDQIRPAHLNQEITWNHRPLDVERMAQAAEYLVGTHDFSAFRAGQCQAKSPIKQLHHLR
VTRHGKMIVIDVRANAFLHHMVRNIAGVLMTIGAGERPVEWARDVLESRVRRTGGVTAHP
YGLYLVQVEYRDEFPLPERYIGPHFLTGFTELDG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgagggcttttcccggatcgcgttgggcgtcgagtacaaaggctcgcgttat
tgcggctggcagcgtcaggcctccggcgttctgacggtgcaggaaaccctcgaagatgcg
ctgtccaaggttgccgcttcacccgtctcgttgatgtgtgccgggcgtacagacgctggc
gtgcatgcctgcgggcaggttgtgcatttcgatacccaggccgagcgttcattgaaggcc
tgggtcatgggcgccaacatcaacctgcctcacgacgtcagtgtgtcgtgggccaaggtc
atgcctgccacgtttcatgcgcgcttcaaagccatcgcccgtcgttatcgctacgtgatc
tacaacgatcagatccgtccggcgcacttgaatcaggaaatcacctggaaccaccgccca
ctggacgtcgagcgcatggcgcaggcggcggagtatctggtagggacgcatgacttcagc
gcctttcgtgccggtcaatgccaggccaagtcgccaatcaagcagttgcaccacctgcgt
gtgacccggcacggcaagatgatcgtgatcgatgtgcgcgccaatgcctttctgcaccac
atggtgcgcaatatcgccggcgtgctgatgaccatcggggccggtgagcgcccggttgaa
tgggcgcgtgatgtgcttgaaagccgcgttcggcgcaccggcggcgtgacggctcatccg
tatggtctgtacctggtccaggtcgagtaccgtgacgaatttccgttacccgagcgctac
atcggtccgcactttcttacaggctttacggaattggacggctga
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