Pseudomonas avellanae: BKM03_11650
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Entry
BKM03_11650 CDS
T05369
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00071
Fatty acid degradation
pavl00280
Valine, leucine and isoleucine degradation
pavl00310
Lysine degradation
pavl00362
Benzoate degradation
pavl00380
Tryptophan metabolism
pavl00410
beta-Alanine metabolism
pavl00640
Propanoate metabolism
pavl00650
Butanoate metabolism
pavl00907
Pinene, camphor and geraniol degradation
pavl00930
Caprolactam degradation
pavl01100
Metabolic pathways
pavl01110
Biosynthesis of secondary metabolites
pavl01120
Microbial metabolism in diverse environments
pavl01200
Carbon metabolism
pavl01212
Fatty acid metabolism
Module
pavl_M00087
beta-Oxidation
pavl_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
BKM03_11650 (fadB)
00650 Butanoate metabolism
BKM03_11650 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
BKM03_11650 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
BKM03_11650 (fadB)
00310 Lysine degradation
BKM03_11650 (fadB)
00380 Tryptophan metabolism
BKM03_11650 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
BKM03_11650 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
BKM03_11650 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BKM03_11650 (fadB)
00930 Caprolactam degradation
BKM03_11650 (fadB)
Enzymes [BR:
pavl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
BKM03_11650 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
BKM03_11650 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
BKM03_11650 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
BKM03_11650 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AVB19821
UniProt:
A0AAD0GR33
LinkDB
All DBs
Position
2339782..2341947
Genome browser
AA seq
721 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDAVKADASVKGVIVTS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLGVPTVVAINGIALGGGLE
MCLAADYRVISSSARVGLPEVKLGLYPGFGGTVRLPRIIGADNAIEWIASGKENSAEDAL
KVGVVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAAQSLIGLFLNDQEL
KKKAKGYDEVARDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVEANVG
ENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEEAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEANRLGQKNGKGFYAYETDKKGKP
KKVNDPAVLDVLKPIVYEQREVSDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADRYAELGALYQPTAKLREMAANGQSFFGQASSE
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgcctcaccctcaacgaactg
cgccaggcggtcgacgccgtcaaggcagacgcatcggtcaagggcgtgatcgtcaccagc
ggcaaggacgtgttcatcgtcggtgccgacatcaccgagttcgtcgacaacttcaagttg
ccggaagccgaactggtcgcgggcaatctggaagccaacaggattttcagcgatttcgaa
gacctgggcgtgcccaccgttgtcgccatcaacggcattgcgctgggcggcggtctggaa
atgtgcctggccgcagactatcgagtcatctccagcagcgcccgtgtcggcctgccggaa
gtcaagctgggcctgtatccaggtttcggcggcaccgtgcgcctgccgcgcatcatcggc
gccgacaatgccatcgaatggatcgcatcgggcaaggaaaactccgcagaagacgcgctt
aaagtgggtgtcgtcgatgcagtagtggctcccgagaagcttcaggctgccgcgcttgac
ctgatccagcgcgctatttccggcgagttcgattacaaggccaagcgtcagccaaaactg
gacaagctcaaactgaacgccatcgagcagatgatggcattcgagaccgccaagggtttt
gtcgcaggtcaagccgggccgaattatccagcgccggtcgaagccatcaagaccatccag
aaagccgccaacttcggtcgtgacaaggcactggaaatcgaagccgccggtttcgtgaaa
atggccaagacctcggcagcacagagcctgatcggcctgttcctgaatgatcaggagctg
aaaaagaaagccaagggctacgacgaagtggctcgcgacgtgaaacaggccgccgtgctg
ggtgccgggatcatgggcggcggtattgcctatcagtcagcggtcaagggcacgccgatc
ctgatgaaggacattcgcgaagaagccattcagctgggcctgaacgaagcctccaagctg
ctgggcggtcgccttgaaaaaggccgtctgaccgctgcgaagatggcagaagcgctaaac
gcgattcgtcctacgctgtcctacggcgattttggcaatgttgacctggtggtcgaagcc
gttgtcgagaatcccaaggtcaagcaggctgtactcgctgaagtcgaagctaacgtcggt
gaaaacaccattctggcttccaacacgtcgaccatttccatcagcctgttggcgcaagcc
ctcaagcgcccggaaaacttcgtcggcatgcacttcttcaaccctgtgcacatgatgccg
ctggtggaagtaatccgtggcgagaaatccagcgaggaggctgtcgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgattgtggtcaatgactgcccgggctttctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaggctggtcagcgcaggcgtggat
ttcgtacgcatcgacaaggtcatggaaaaattcggctggccgatgggccctgcctacctg
atggacgttgtcggtatcgacaccggccaccacggccgtgacgtgatggctgaaggcttc
cccgaccgcatgaaagacgaccgtcgttctgccattgacgcgctgtacgaagccaatcgt
ctgggccagaagaacggcaagggcttctatgcctacgagaccgacaagaagggcaagccc
aagaaggtcaacgatccggcggtgctggacgtgctcaagccgattgtctacgagcagcgt
gaagtgagcgatgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtt
cgctgcctggaagacggcatcgtcgaaacggctgccgaagctgacatgggcctgatctac
ggtattggtttccctccattccgtggcggtgcgctgcgctacatcgattccatcggtgtt
gccgaattcgttgccctggctgatcgatatgccgagctgggtgccctgtatcaaccgacc
gcgaagctgcgtgagatggccgccaatggccagagcttctttggtcaagcgtcttccgag
gtatga
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