Pseudomonas avellanae: BKM03_12205
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Entry
BKM03_12205 CDS
T05369
Symbol
clpA
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pavl03110
]
BKM03_12205 (clpA)
Chaperones and folding catalysts [BR:
pavl03110
]
Heat shock proteins
HSP100
BKM03_12205 (clpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
AAA_lid_9
ClpB_D2-small
AAA_5
Clp_N
AAA_16
AAA_22
Sigma54_activat
RuvB_N
AAA_14
TniB
AAA_18
AAA_7
Mg_chelatase
TsaE
AAA_3
nSTAND3
AAA_6
RNA_helicase
ATPase_2
NACHT
IstB_IS21
Zeta_toxin
TIP49
AAA_33
bpMoxR
Rad17
AAA_28
Torsin
IPT
AAA_17
CobT_C
DUF815
SKI
Motif
Other DBs
NCBI-ProteinID:
AVB19918
LinkDB
All DBs
Position
2455207..2457480
Genome browser
AA seq
757 aa
AA seq
DB search
MLNRELEVTLNLAFKEARSKRHEFMTVEHLLLALLDNEAAATVLRACGANLDKLKHDLQE
FIDSTTPLIPVHDEDRETQPTLGFQRVLQRAVFHVQSSGKREVTGANVLVAIFSEQESQA
VFLLKQQSVARIDVVNYIAHGISKVPGHGEHSSEGEQDMQDDEGGEASSSGNPLDAYASN
LNELARQGRIDPLVGRESEVERVAQILARRRKNNPLLVGEAGVGKTAIAEGLAKRIVDNQ
VPDLLANSVVYSLDLGALLAGTKYRGDFEKRFKALLNELRKRPQAILFIDEIHTIIGAGA
ASGGVMDASNLLKPMLSSGEIRCIGSTTFQEFRGIFEKDRALARRFQKVDVSEPSVEDTI
GILRGLKSRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPVE
KRVKRIDVPQVEDIVAKIARIPPKHVNSSDKELLRNLERDLKLTVFGQDAAIDSLSTAIK
LSRAGLKSPDKPVGSFLFAGPTGVGKTEAARQLAKALGVELIRFDMSEYMERHTVSRLIG
APPGYVGFDQGGLLTEAITRQPHCVLLLDEIEKAHPEVFNLLLQVMDHGTLTDNNGRKAD
FRNVIVIMTTNAGAESAARASIGFTHQDHSSDAMEVIKKSFTPEFRNRLDTIIQFGRLSH
EVIKSVVDKFLTELQAQLEDKRVLLEVSEAARSWLAQGGYDAAMGARPMARLIQDKIKRP
LAEEILFGELSEHGGVVHIDIRDGEITFDFETTAEMA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaccgtgagctcgaagtcaccctcaatcttgccttcaaggaggcacgttcgaag
cgtcatgagttcatgacggtcgagcatctcctgctggctctattggataatgaggctgca
gccactgtcctgcgtgcctgcggcgcaaacctcgataaactcaagcatgatctgcaggag
ttcatcgactctaccacgccgctgatccccgtccacgacgaggaccgcgagactcaacca
acgctgggtttccagcgcgttctgcaacgcgctgtcttccacgtgcaaagctctggcaag
cgcgaagtaaccggcgccaacgtgctggttgcaattttcagtgagcaggaaagccaggcc
gtatttctgctcaagcagcagagtgtggcccggatcgatgtcgtcaactacattgcccac
ggtatctccaaggttccagggcatggcgaacactcttctgaaggtgagcaagatatgcag
gacgacgagggcggtgaagcatcttcctcaggcaatcctctggatgcctatgccagcaat
ctgaacgaattggcgcgtcaggggcgcatcgatccactggtcggccgcgaaagcgaagtt
gagcgtgtggcgcagattctcgctcgtcggcgcaagaacaacccattgttggtcggagag
gccggggtgggtaaaaccgccattgccgaaggccttgccaagcggatcgtcgacaatcag
gtgcctgacctgcttgccaacagcgttgtctattcgcttgacttgggtgccttgctggcc
gggaccaaataccgtggtgatttcgagaagcgcttcaaggcgctgctcaacgaactgcgc
aagcgtccgcaggcgattctgttcatcgacgagatccacacgatcattggtgccggtgcg
gcgtccggcggggtgatggatgcctcgaacctgctcaagccgatgctgtcttccggcgag
attcgctgcatcggttcaacgacgttccaggagtttcgcgggattttcgagaaggaccgt
gccttggcacgtcgcttccagaaagtcgatgtgtccgagccttcggtcgaagacaccatc
ggaatcctgcgcggcctgaaaagccgcttcgagcagcatcacagcatcgaatacagtgat
gaagccttgcgcgccgccgctgagctcgcctcgcgctacatcaatgaccgtcatatgccc
gacaaggccatcgacgtgattgacgaggcgggtgcctatcagcgcctgcaaccggtcgaa
aaacgcgtcaagcgcatcgacgtgccgcaggttgaagacattgtcgccaagatcgcccgt
attccgccgaaacacgtcaacagctctgacaaggaactgctgcgtaacctggagcgcgat
ctcaagctgacggtgtttggtcaggatgcagcgatcgattcgctgtctacggccatcaag
ctgtcgcgtgcagggctcaagtcgccggacaagccggttggttccttcctgttcgccggg
cctaccggtgtcggcaagaccgaagctgctcgtcagttggcaaaagccttgggtgttgag
ctgattcgtttcgacatgtccgagtacatggagcgtcacaccgtttctcgcttgatcggt
gcacctcctggctacgtcggtttcgatcagggcggtttgctgacagaagccattacccgc
caaccacactgcgtgctgttactcgatgaaatcgagaaggcgcatccggaagtcttcaat
ctgctgttgcaggtgatggaccacggtacgctcaccgataacaacgggcgcaaggcagac
ttccgcaacgtgatcgtgatcatgaccaccaacgccggtgctgaatccgcggcgcgggct
tcgatcggtttcacgcatcaggaccattcgtctgatgcaatggaagtgatcaagaagagc
ttcactccagagttccgcaaccgtctggacacgatcattcagtttggtcgtctcagccac
gaagtcatcaagagcgtggtggacaagttccttaccgagcttcaggcccaactggaagac
aagcgcgtactgctcgaagtctccgaggcggcaagaagctggctggcgcagggcggttac
gatgcagcgatgggcgcacgcccgatggctcgcctgattcaggacaagatcaaacggccg
ttggctgaagagatcctgtttggcgagctgtcagagcatggcggcgtcgtgcacatcgac
atccgtgatggcgagatcactttcgatttcgaaaccacggcagaaatggcctga
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