Pseudomonas avellanae: BKM03_13055
Help
Entry
BKM03_13055 CDS
T05369
Name
(GenBank) nucleoid-structuring protein H-NS
KO
K01666
4-hydroxy 2-oxovalerate aldolase [EC:
4.1.3.39
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00360
Phenylalanine metabolism
pavl00362
Benzoate degradation
pavl00622
Xylene degradation
pavl01100
Metabolic pathways
pavl01120
Microbial metabolism in diverse environments
pavl01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
BKM03_13055
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BKM03_13055
00622 Xylene degradation
BKM03_13055
00621 Dioxin degradation
BKM03_13055
Enzymes [BR:
pavl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
BKM03_13055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
AVB20050
UniProt:
A0A6H3CVI0
LinkDB
All DBs
Position
2652356..2653384
Genome browser
AA seq
342 aa
AA seq
DB search
MANVKVLDVTLRDGGYRNNFDFTDDQARVITTGLADAGVDLCEIGYCKGSFSPQAGHGLT
SDVGARYIQTIREAARGRIELAVMVHPRNVSPDDFAMLREQGVSMIRVCLRREQLDDGLA
TVSLARDHGFSVSANVTHVTSQTPGAVIDTAVRAEGAGADIICCADSNGHMLPTDVHRLF
SRLSSRLVVPLGFHAHNNLSLALANAAAAVEAGAEYIDTSVCGMGKGAGNLHLSMLVAYL
ERVGVSHGYDLVKVIELSETIASLVPQSNMPSPFMDIVLGTYNFPFDVRQRIQETLERFQ
LTSEYRALEVMHQQDQIARLAPRATLPHAFNKPSRSVLEVSR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtaaaagttctcgacgtcaccttgcgtgatggcggatatcgaaataacttt
gacttcactgacgatcaggcgcgggttattacaacggggctcgcagatgccggcgttgat
ctgtgtgaaataggctactgcaagggctcgttttcccctcaggccgggcatggccttacc
agtgatgtgggcgcgcgttacatccagacgattagggaggcggcccgcggtcgaatagaa
ctggcggtgatggtccaccccagaaatgtgtcgccagacgactttgccatgctcagagag
cagggcgtttcgatgattcgggtctgtctgcgccgcgagcaactggacgacggcctcgct
actgtgtcgctggctcgggatcatgggttcagtgtcagcgccaatgtgacccatgtgaca
tcgcaaacccccggcgcggtcattgatacggcggttcgcgcagaaggcgcgggggcggac
atcatctgttgcgcagattccaacggccatatgttgcccacagacgtgcatcgtctgttc
agccgcctttcaagcaggcttgtcgtgccactggggtttcatgcgcacaacaacctgtct
ctggcactggccaatgcagcagcggcggtcgaggcgggtgccgaatacatcgacacctcc
gtgtgcgggatgggcaaaggtgccggcaatctgcatttgagcatgctcgttgcgtacctg
gagcgggtgggcgtgagccatggttatgacctagtgaaggttatcgagttgtccgagacc
atcgccagcctggtaccgcagagcaatatgcccagcccgttcatggatatcgtcctgggt
acttacaactttcctttcgatgttcggcagcggatacaggaaaccctcgagcgctttcag
ttgacgtccgagtaccgtgcgcttgaagtcatgcatcaacaggatcagattgcgcgtctg
gcaccccgggcgacgttgccccatgcgttcaacaaaccgtccaggtcggtactggaggtg
tcgagatga
DBGET
integrated database retrieval system
