Pseudomonas avellanae: BKM03_13450
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Entry
BKM03_13450 CDS
T05369
Symbol
glgX
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00500
Starch and sucrose metabolism
pavl01100
Metabolic pathways
pavl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
BKM03_13450 (glgX)
Enzymes [BR:
pavl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
BKM03_13450 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
GHL5
Motif
Other DBs
NCBI-ProteinID:
AVB20115
UniProt:
A0AAD0DYA6
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Position
complement(2728749..2730932)
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AA seq
727 aa
AA seq
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MNTKSTPAADESSASHDNPASTPTRIREGLPFPLGASWDGLGVNFALFSANATKVELCLF
DSTGEVELERIELPEYTDEIYHGYLPDAHPGLIYGYRVYGPYDPKNGHRFNHNKLLIDPY
AKQLVGELKWSEALFGYTIGHADGDLSFDERDSAPFVPKSKVIDEAYTWGRDQRVGTPWD
KTIFYETHVRGITMRHPEVAEELRGTFAGLGSAPVVDHIRKLGVTSVELLPIHAFVNDQH
LLQKGMTNYWGYNSIAFFAPDPRYLASGKIAEFKEMVAHLHHAGLEVILDVVYNHTAEGN
ELGPTLSMRGIDNASYYRLMPDDKRYYINDSGTGNTLDLSHPCVLQMVTDSLRYWASEMH
VDGFRFDLATILGRYHDGFDERHSFLVACRQDPILRQVKLVAEPWDCGPGGYQVGGFPPG
WMEWNDKFRDTVRAFWKGDEGQLSDFAARMTASGNMFNQRGRRPQASVNFITAHDGFTLH
DLVSYNDKHNEANDENNQDGSNNNVSWNHGVEGPTEDPEINTLRLRQMRNFFATLLLAQG
TPMIVAGDEFARTQHGNNNAYCQDSEIGWINWDLDEDGEALLKFVTRVIKLRQSYPILRR
SRFLVGDYNEEIGVKDVTWLAPSGEEMSVEQWHDANGRCLGMLMDGRAQETGIRRPGADA
TLLLVVNAHHDGVNFTLPQVPEGTHYECLIDTNQDDARSKEKFAFGSHYTVTPRSLLLFE
VKREDQQ
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgaagtcaactccagcggcagatgaaagctccgcttcgcacgataatcctgcc
agcaccccgacgcgcattcgtgaagggcttccctttcctctcggtgccagctgggacggt
ctgggcgtcaacttcgccctgttctcggccaacgccaccaaagtcgaactctgcctgttc
gattcgaccggtgaagtcgagctggagcgtatcgagcttccggaatacaccgacgagatc
taccacggctatctgcccgacgctcaccctgggctgatctacggctaccgtgtttatggt
ccttacgatccgaagaacggccatcgcttcaaccacaacaaactgctgatcgacccgtac
gccaagcaattggtcggtgagctgaaatggtcggaggcgctgttcggctacaccatcggc
cacgctgacggcgacctgagcttcgacgagcgcgacagcgcgccgttcgtgccaaaaagc
aaggtgattgacgaagcctacacctggggccgtgaccagcgtgtcgggacgccgtgggac
aagaccattttctacgagacccacgtgcgcggcatcaccatgcgccaccctgaggtcgcg
gaagagttgcgcggtacgtttgcaggcctgggatcagcgcccgtcgtcgatcacatccgc
aagctgggcgtgacctccgtcgagctgctgccgatccatgcgttcgtcaacgatcagcat
ctgttgcaaaaaggcatgaccaactactggggctacaacagcatcgcgttcttcgccccg
gacccgcgctacctggccagcggcaagatcgccgagttcaaggaaatggtcgcgcacctg
caccatgcaggtctggaggtcattctcgacgtggtctacaaccacaccgccgagggcaac
gagctgggcccgaccctgtcgatgcgcggtatcgacaacgcctcgtattacaggctgatg
ccggacgacaaacgctattacatcaacgattccggtacgggtaacacccttgacctgagc
cacccttgcgtattgcagatggtcaccgactcgctgcgttactgggcgtcggaaatgcac
gtcgacggcttccgcttcgacctggcaaccattctcggtcgctatcacgatggcttcgac
gagcgtcacagctttctggttgcgtgccgtcaggacccgatcctgcgtcaggtcaaactg
gtcgccgagccgtgggactgcggtccgggtgggtatcaggtgggcggtttcccaccgggc
tggatggaatggaacgacaagttccgcgacaccgtgcgggcgttctggaaaggcgacgaa
ggccaactgtccgacttcgctgcgcgcatgaccgcttcgggcaacatgttcaaccagcgc
ggtcgtcgccctcaggcgtcggtcaacttcatcacggcgcacgatggcttcacgctgcac
gacctggtgtcgtacaacgacaagcacaacgaggccaacgacgaaaacaaccaggacggc
agcaataacaacgtgtcctggaaccacggcgtcgaaggtccgaccgaagacccggaaatc
aacaccctgcgtctgcgccagatgcgtaacttcttcgccacattgctgctggctcaaggc
acgccgatgatcgttgccggcgatgaattcgcgcgcactcagcacggcaacaacaatgcc
tactgccaggacagtgaaattggctggatcaactgggatctggatgaagacggcgaagcg
ctgctcaagttcgtcacccgtgtgatcaagctgcgtcagagctacccgatcctgcgtcgt
agccgcttcctggtaggcgactacaacgaagaaatcggcgtcaaggacgtgacctggctt
gcgccaagtggcgaagaaatgagcgtcgagcagtggcacgatgccaacggccgttgcctg
ggcatgctgatggatggccgcgcgcaggaaaccggcattcgtcgtccgggtgccgacgcc
acgctgctgttggtggtcaacgcgcaccatgacggcgtcaacttcaccttgccgcaagtg
ccggaaggcacccattacgagtgcctgatcgacactaatcaggatgatgcacgcagcaag
gagaagtttgcgttcggttcgcattacaccgtcaccccacgttcgctgctgctgtttgaa
gtcaagcgtgaagatcagcaatga
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