Pseudomonas avellanae: BKM03_14820
Help
Entry
BKM03_14820 CDS
T05369
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00300
Lysine biosynthesis
pavl00470
D-Amino acid metabolism
pavl01100
Metabolic pathways
pavl01110
Biosynthesis of secondary metabolites
pavl01120
Microbial metabolism in diverse environments
pavl01230
Biosynthesis of amino acids
Module
pavl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BKM03_14820
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BKM03_14820
Enzymes [BR:
pavl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BKM03_14820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AVB20342
UniProt:
A0AAD0DY65
LinkDB
All DBs
Position
complement(3030076..3031284)
Genome browser
AA seq
402 aa
AA seq
DB search
MHKLPETVLGAIHEARALESDPLATFIYDLDALQQHVSEVMAALPAGVELYYAIKANSEA
LMLETLAPLVSGFEISSGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLES
LNEIQRLQHLAEQTGRVQPVFIRINPQLPAAQSSKLAMAGTATPFGIDEADLAEAVRLVD
SATHLTLKGFHVHAMSHQMSVERHEQLLDFYLQRWQAWKALARYPEHLTHFNVGGGIGVD
YLNTQQFDWQRLCRYLEKRLGEQPDAPILRFEPGRFISAYCGYYVIEVLDRKTSHGEHFL
VCRGGTHQFRLPVAQSHDHPVIHLPSVPPTAASSEQAYTVVGQLCTPKDVLSRRQPFSGV
NIGDLLVLPMAGAYGYNISHADFLCHPRPPQHFVRNGERVSQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcataagctgcctgaaaccgtactgggcgccatccacgaggcccgcgcgctcgaaagc
gacccgctggcaacgttcatctacgacctggacgcactgcagcagcatgtcagcgaagtc
atggcggcgctaccggctggcgtggagctgtattacgcaatcaaggccaacagcgaagcg
ttgatgcttgagaccctggcccctctggtcagcggtttcgaaatttcctcaggcggcgag
atcgagcgggtcatggcctgcccgacgcgcaagccctacgtgttttccggccccggcaaa
ctcgactcggacctgcgctcagcgctgctcaacaaggtcgaagccgttcacctggaaagc
ctcaacgagatccagcgcctgcagcatctggccgaacaaacagggcgcgtgcagccggtg
ttcatccgcatcaatccacagctaccggcagcacaatcgagcaagctggcgatggccggg
accgcgaccccgttcggcatcgacgaagcggatctggccgaagccgtgcgccttgtggac
agcgccacgcacctgacgctcaaggggttccatgtacacgccatgtcacaccagatgtcg
gtcgagcgccacgagcagctgctggatttctacctgcaacgctggcaggcctggaaagcg
ctggcccgttaccccgagcacctgacccatttcaacgttggcggcggcattggcgtcgat
tacctgaacacccaacaattcgactggcagcgcctgtgtcgctacctggaaaaacgcttg
ggcgagcagcctgacgcgccgatcctgcgtttcgagccgggacgcttcatcagtgcgtat
tgcggctattacgtgatcgaggtgctggaccgcaaaaccagtcacggtgagcattttctg
gtctgccggggcggtacgcaccagttccgcctgccggttgcgcagagccatgatcatccg
gttatccacttgccgagcgtgccaccgaccgctgcgtcgtctgaacaggcgtacaccgtt
gtcggccagttgtgtacgcccaaagacgtgctgagccgtcgccagcccttcagcggcgtg
aacattggcgacctgctggtcctgccgatggcgggcgcctatggctacaacatctcgcac
gccgactttctgtgccatcccagaccgccacagcactttgtgcgcaacggcgaacgggtc
agccaatga
DBGET
integrated database retrieval system