Pseudomonas avellanae: BKM03_15410
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Entry
BKM03_15410 CDS
T05369
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
pavl
Pseudomonas avellanae
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Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Motif
Other DBs
NCBI-ProteinID:
AVB20442
UniProt:
A0AAD0DQY4
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Position
3179368..3181995
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AA seq
875 aa
AA seq
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MFILAIFPHPAEGACNLAPTPGNAVQVCDSGNSGPFTGLSTTRHTLVFPAGGTGTVNGTI
TYGAQADSIDMSSGRILGNVNQGAGTDTFILSSGEITGEISQGANPDDFVMSGGTLGSLA
QGDGLDTFLMTGGTIVRAFEDGDRAVMTGGSIGRVDMKLDNNVFELSGGSIINNLVAGFG
QDTITVSGGSIGGAISVSGGDDRITVSGGEIRGEIRASFGNDSFDWLNNGYVRGSVLMAD
GNDTAQLYNLSEYLTSSNPLLDGGPGDDVLTFGNTVVSRPDHYTQWETVNLLNGSQMDMT
GALTLGDSVSNTGTLTVDDSSTLRSTSGSIAAFNTASRATLDNAGTLDLTASGSGSSVTD
TLTVNGNYFGRAGRLLLQSTLGDETSPSDKLVVSQGTIGGTTRMRVSNINGLGALTQGNG
IEVVQATRGATSEATAFSLQNPLSVGAYDYYLFKGGTTAGSENSWFLRSAVIAPPLPETP
PPSEPVPGPIPTPLPEPAPEPTPPSIPPEPNEPTVPPAQPPLTDPIPTPAQLPATTLPVA
AVGTPSLPEPIRGAAPIPLYRPEVANYAVIPPAVATLALTSLGTFHERQGDQSLLAQSGA
APAGWARVFGSDFKQQWSGTVSPGLDASLKGYQIGHDVYAWSLDGQQTLRVGLFVAQNSL
DGKVQGFAGGFHERHTGRIKLRGDSVGAYWTLSSPTGSYVDALVMSTRLDGDSRSDRGLR
IDTQGHALSLSVEAGHPFALSPRWVAEPQVQIIHQRIDLDDQHDGISHVGFDSQPYNTGR
LGIRFKGRYALAAIPIEPYLRVNLWRNAGGHDTVAFEHTERVKTAHRSTTGSLGGGMVIK
VASDTSVYWSADYNSDLNNHDSSGVNASLGVRLAW
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
gtgttcattctggcaatcttcccgcaccctgccgaaggcgcctgcaacctggcgcccacg
cccggcaacgccgttcaagtctgcgacagcggtaacagcggcccgtttaccggcttgagc
acgacccgtcacacgctggtatttccagcgggcggcacgggcaccgtcaacggcaccatt
acttacggggcgcaagcggacagcatcgacatgagttcgggccggatactgggtaacgtc
aatcagggtgcgggcactgacaccttcatcctttcaagcggtgagatcactggcgaaatc
agccagggcgcgaaccccgacgatttcgtcatgagtggcggcacgctcggttcgctcgct
cagggtgacgggctggacacctttctgatgaccggaggcaccatcgtccgtgctttcgag
gacggcgaccgggcagtgatgaccggcggcagtatcggccgggttgacatgaaactggac
aataacgtcttcgagctttctggtggcagcattatcaacaatctggtcgccgggttcggc
caggacaccattacggtgtcgggcggcagtattggtggcgccatcagcgtcagtggtggt
gacgaccggataaccgtcagtggtggtgaaattcgtggagaaatacgcgcaagcttcggc
aacgacagctttgattggctcaacaacggctacgtgcgcggcagcgtgttgatggccgat
ggcaacgataccgcgcagttgtacaacctcagcgagtacctgacgagcagcaaccccctg
ctcgacggcggccctggcgatgatgtactgacgtttggcaacaccgtggtgtcccggcca
gatcactacacccagtgggaaaccgtcaacctgttgaatggatcgcagatggacatgacc
ggggcgctgaccctcggcgacagcgtcagtaataccggcaccctcactgtcgatgacagc
agcacgctgcgttcaacttccggcagcatcgctgcgttcaacaccgcgtcccgcgcaacc
ctcgacaacgcaggaacgctggacctgaccgccagcggcagcggcagctcggtgaccgat
acccttaccgtgaacggcaactacttcggccgggctggccggttactgctgcaatcaaca
ctgggagacgaaacctcgcccagcgataaactggtggtgtcacagggcaccatcggcggt
acgacccgcatgcgggtgagcaatatcaatggcctgggtgcgcttacccaaggcaacggc
atcgaggtggtgcaggcgacccgaggcgctaccagcgaggcgacggcattttcgttgcag
aacccgttgtccgtgggtgcctatgactattacctgttcaagggcggcaccacggcaggc
agcgaaaacagctggtttctgcgctcggcggtgattgcaccgcctttgcccgaaacgcca
cccccaagcgaacctgttcctgggcccatacctacaccgctgccggaacctgcgcccgaa
ccgacaccaccctcgattccacctgagccaaacgaaccgaccgtgcccccggcccaaccg
cctctaactgacccgatacctacgcctgcacaacttccggcaaccactcttcccgtagcg
gcggtcggcacgccatcgctgccggaaccgattcgcggcgcggcccctatcccgctgtac
cgtccggaagtcgccaattacgcggtcatcccgcccgcagtggcaacactggcgctgacc
tcgctgggcaccttccatgagcgtcagggcgatcagagcctgttggcacaatcgggtgca
gcgccggctggctgggcgcgagtgtttggcagtgacttcaaacaacaatggtctggtacg
gtgagccccggcctggacgcatcgctcaagggctatcagatcggccatgacgtgtatgcc
tggtcacttgatgggcagcagaccctgcgcgtcggcctgtttgtcgcccaaaacagtctg
gacggcaaggtgcagggctttgcgggcgggttccatgagcggcacaccgggcggatcaaa
ctacggggcgatagcgtcggggcctactggacgctctcctcgcccaccggaagctacgtc
gatgcactggtgatgagcacgcgcctggatggcgatagccgctccgaccgaggcctgcgc
atcgacacgcaaggccatgccctgagcctttctgtggaagccggtcacccgtttgcgctg
tcgccgcgatgggtcgccgaaccgcaggtacaaatcattcatcagcgcattgaccttgac
gatcagcatgacggtatttcacacgtgggttttgacagccagccctacaacaccgggcga
ctgggcatacgattcaagggccgctacgcattggcagccatacccatcgagccctacctt
cgggtaaacctgtggcgcaatgcgggcgggcatgacacggtggcattcgagcacacagaa
cgcgtcaagacagcccatcgatcaacgacgggcagcctgggcggcgggatggttatcaag
gtcgccagcgacaccagtgtgtactggagcgctgactacaacagtgatctgaataaccac
gattcaagcggagtaaacgccagcctgggcgtcaggctagcgtggtga
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