Pseudomonas avellanae: BKM03_15965
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Entry
BKM03_15965 CDS
T05369
Name
(GenBank) GntR family transcriptional regulator
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pavl03000
]
BKM03_15965
Transcription factors [BR:
pavl03000
]
Prokaryotic type
Helix-turn-helix
GntR family
BKM03_15965
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
MarR_2
HVO_A0261_N
HTH_24
HTH_IclR
TrmB
HTH_Crp_2
Fe_dep_repress
HTH_CodY
HTH_11
HTH_5
DUF6880
HTH_36
HTH_27
HTH_41
Ribosomal_S25
GMT-wHTH
MarR
HTH_29
HTH_23
HTH_28
EAP30
HTH_20
HTH_54
Motif
Other DBs
NCBI-ProteinID:
AVB20537
UniProt:
A0AAD0DYI5
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All DBs
Position
3302938..3303690
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AA seq
250 aa
AA seq
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MKRLPLDDTFKVNRNPVTLREIVLDKLRSAIMNFQLLPGDRLVERDLCDRLGVSRTSVRE
ALRHLESEGLVEFADAKGPRVAIITLEDACDIYELRCVLEGLIVQLFTLRASPKDIRALE
KALEVNRQSLKEGELQQVIDSVQGFYDVLLEGSGNHVAATQLRQLQARISYLRATSVSQE
NRRGASNKEMELMVDAIKSGDPLAAHQASVDHVRNAAKVALEYLKSKQDEDTKVREIVAP
VVLKEPRIGR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcctgccactcgacgacaccttcaaagtcaaccgcaaccccgtcaccctgcgg
gagattgtgctggacaagctgcgcagcgcgatcatgaacttccaactgctgccgggcgat
cgtctggtcgagcgcgacctgtgtgaccggcttggggtcagccgcacatcggtacgcgaa
gcacttcgccatctggagtccgaagggctggtggagttcgccgacgccaaaggcccgcga
gtggccatcatcacgctggaagatgcctgcgatatctacgagttgcgctgtgtactggaa
ggcctgatcgtccagttgttcaccctgcgcgccagccccaaggacatccgcgcgctggaa
aaagcgctggaagtgaatcgccagtcgctcaaggaaggcgagttgcagcaggtcatcgat
tccgtgcagggtttctacgacgtcttgctggaaggctcgggcaaccacgttgcggccacc
cagctacgtcagttgcaggcgcgcatcagctacctgcgcgccacctcggtctcccaggaa
aaccgccgcggtgccagcaacaaggaaatggaactgatggtcgacgccatcaagagcggc
gacccgctggccgcgcatcaggcgtcggtcgatcacgtccgtaacgccgccaaagtcgcg
ctggaatacctgaaatccaagcaggacgaagacaccaaagtgcgcgagatcgtcgcgcct
gtggtcctcaaagaaccccgcataggtcgctga
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