Pseudomonas avellanae: BKM03_16620
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Entry
BKM03_16620 CDS
T05369
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pavl
Pseudomonas avellanae
Pathway
pavl02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
BKM03_16620 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pavl02044
]
BKM03_16620 (tssK)
Secretion system [BR:
pavl02044
]
Type VI secretion system
Imp/Vas secretion system core components
BKM03_16620 (tssK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AVB23154
UniProt:
A0AAD0GTT7
LinkDB
All DBs
Position
complement(3465685..3466980)
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AA seq
431 aa
AA seq
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MLRPQHFQHNDRYYDHQLKVRTRLAGAFNWGFTALEIDPQFLGSGQIVLNQASGIFPDGS
VFDIGDRERPLALDIAPNTSNLSVYVALPIVAGNCIEARSQEQPDVFARFTAYAASVADS
NAGEGSSTPVVCARPEFRLLLGEPQGEHTYVMLKLCHILICSPDKAITLDAEYSATFVNA
GGSRYLMSCLKEVTSLLQHRGDVIATRISSRGQASDAEVGDFMMLQLINRSALVLQHYLE
TRHLHPEELYRLLLTLLGELATFGAETRRPRLESSYQHTDQAATFRSVMLAIRQLLSMVV
EQHALELELQPRQYGVLVSPRIDRELLGTASFVLAARAQCDAEELRVRLPSHLKVGSVES
IRELVALHLPGIRLRPLPVAPRQIPFHANKTYFVLDIDDQAQIGIDKSGGFAFHVSGEFS
GLELQFWAIRN
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ctgctgcgtccgcagcactttcagcataacgaccgttattacgatcatcagttgaaagtc
cgtacccgtctggcgggggcattcaactgggggttcaccgcgttggaaattgatccgcaa
tttctgggctctgggcagattgtgcttaaccaggcctcgggcatattcccggatggcagc
gtcttcgatatcggtgaccgtgagcgtccattggcgctggatattgcgcccaatacttca
aacctgtcggtctatgtggcactgccgatcgtagcgggtaattgcatcgaagcacgcagc
caggaacagccggatgtgttcgcgcgtttcaccgcctacgccgccagcgtcgcggattcc
aacgctggagaaggcagttccacaccagttgtctgcgcgcgccccgagtttcgtctgctg
ttgggtgaaccgcaaggcgagcacacctacgtgatgctcaagttgtgccacatcctgatc
tgcagccctgacaaggcaatcacactggacgccgaatactctgccacattcgtcaatgcc
ggcggttcccggtacttgatgtcgtgcctgaaggaggtcacaagcctgttgcagcaccga
ggcgatgtcattgctacgcgcatcagttcgcgcggccaggccagcgatgcggaagtgggc
gatttcatgatgctgcaattgatcaatcgcagtgcgttggtgcttcagcattatctggag
actcgacatcttcaccctgaagagctgtatcgcttattgctgacgctactgggtgaactg
gcgacgtttggcgctgaaacaaggcgccctcgactggaaagcagctaccaacacactgat
caggcggcgacgttcaggagtgtgatgcttgccattcgacaattgttgtcgatggtagtt
gaacagcatgcgctggaactcgagttgcagcccaggcagtacggtgtattggtttctcct
cgcatcgaccgtgaactgctgggaacggcgtcatttgtgctggcggcccgcgcgcaatgc
gatgccgaagaactgcgtgttcgattgccgtcgcacctcaaggtcggttctgtggagagt
atccgtgaactggtagcgttgcatctgcccggtatcaggctcaggccgctgcccgtggca
ccccgacagatcccgtttcatgccaacaagacttacttcgttctcgacatcgatgatcag
gcgcagattggaatcgataaatccggagggttcgcctttcatgtgtcaggcgagttctcc
ggacttgaactgcagttttgggcgatcagaaactga
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