Pseudomonas avellanae: BKM03_16880
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Entry
BKM03_16880 CDS
T05369
Name
(GenBank) HAMP domain-containing protein
Organism
pavl
Pseudomonas avellanae
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Paralog
GFIT
Motif
Pfam:
NIT
MCPsignal
HAMP
DUF1664
RNF152_C
CD225
RUN
Motif
Other DBs
NCBI-ProteinID:
AVB20698
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Position
complement(3519983..3521944)
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AA seq
653 aa
AA seq
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MLRNAPLSIKLLLILMFPLLGFLAFAGIFVADKSENLGDMRRAVTATSAAQKLSNIVTTL
QLERGASGVFLGSGGKSMQDKLKTFRQETDKAIVEMRAQSADGIPGLEKVNRALDDLIAL
RLKVDALSINGTESSTRFTDVVKTLIGFSYSLEASIEDPEILRALSSLNQFVDMKERAGR
ERVLLVQAFNQNRFDAPLLSRFSRNLGEFSGYLEAFQRWSPEIFKTKLNDVMQQPGSLEV
ARLQHLGFDTPLGDALNIKPEDWFNLATVRIDMMAQVEAELGRTVVSLASNARSAAESSL
YIAVGTVILMLVVVLWLASVIIRNIKIAVVDVNRTLIALSTRDLTARTRYTGKDEFGEIS
RNLDNMAQQISEVIGEIGSATAQVATAAEQSSAVALQTSQNVAQQRLGTDQMATAISQMS
ATVKDVARSTTDAAAMSQRVNISTVQGKAEIENTISLIQGLSLQAEQTSQIIGELKGESN
AISSVLDVIRGVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAKKTQESTVSIQN
MIANLQSGSERAATSMQETLGKAQAGASNVVRAGELLEEIAEGIASISDRNIQVASAAEE
QSLVAEEIHRNVNDINALVIQVSAGAEQTAVTSRELARLAEQQQGLVGRFKVS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcttagaaatgctcctttgagtattaaattactgctgattctaatgtttcccctgctg
ggttttctggcctttgcaggtatcttcgtggccgacaaaagcgagaatctcggtgacatg
aggcgcgcagtgacagccaccagtgctgcacagaagctgagtaacatcgtcactaccctc
caactcgagcgcggggccagtggcgtgtttctgggcagcggcggcaagtccatgcaagac
aagctgaaaacctttcgccaggaaacagacaaggcgattgttgagatgcgtgctcaatcg
gccgacggtattcccgggctggaaaaggtgaatcgcgcactggatgacctcatcgcgctg
cgcctcaaggtcgatgcgctttcgatcaatggcactgaatcctccacgcgtttcaccgac
gttgtcaaaacacttatcgggttctcatattcgctggaagcgagtatcgaggatccggaa
atactgcgtgccttgagttcgctcaatcagttcgtggatatgaaagaacgtgccggtcgc
gaacgtgtattgctcgttcaggcattcaatcagaaccgctttgacgccccattgttatca
cgcttcagtcgtaacctgggagagttctctggctacctggaagcctttcaacgctggtcc
cctgaaatatttaaaaccaagctcaatgatgtcatgcaacaaccgggatcgctggaagta
gcccgcctgcaacatctggggttcgatacgccgctgggcgatgcgctcaacatcaagccg
gaagactggttcaatcttgctaccgtgcgtatcgacatgatggcgcaggtagaagcagag
ctcggccggaccgtcgtgagcttggccagcaacgcacgtagcgctgctgaaagcagcctg
tacatcgcggtcggcaccgtcatcttgatgctggtcgtcgtgttgtggctggcctcggtg
atcatccgcaacatcaagatcgccgttgtcgatgtcaaccgtacgttgattgcgctatcc
acccgtgacctcaccgccagaacccgttacaccggcaaggacgagttcggcgagatctcg
cgcaacctggacaacatggcgcaacagatcagcgaagtcatcggcgaaatcggcagcgcc
accgcacaggtcgccaccgccgccgagcagtcttcagcggtcgctttgcagaccagccag
aacgtcgctcagcaacgtctgggtactgatcagatggccactgccatcagccagatgagc
gccaccgtcaaagacgtcgcacgcagcaccaccgacgctgccgcgatgtcgcagcgggtc
aacatcagcacggtgcagggcaaggccgagatcgaaaacaccatcagcctgattcaaggg
ctgtcgcttcaggcagagcagacctcgcagatcattggcgagctcaagggcgagagcaac
gccatctcctcagtgcttgatgtgattcgtggtgtcgccgaccagaccaacctgctggca
ctcaacgcagccatcgaagccgcccgcgcaggcgagcagggccgcggtttcgcggtggtt
gccgacgaagtgcgcaaccttgcgaaaaagacgcaggagtctacggtcagcattcagaac
atgatcgccaacctgcagtccggctccgaacgcgccgccacgtccatgcaggaaaccctg
ggcaaagcacaggcgggcgccagcaacgtagtgcgcgccggcgaactgctggaagaaatc
gccgaaggcatcgccagcatcagcgaccgcaacatccaggtcgcctcggccgccgaagaa
caaagcctggtggccgaagaaatccaccgcaacgtcaacgacatcaacgcactggtcatt
caagtgagtgcgggtgccgagcagaccgccgtgaccagtcgcgaactggctcgattggcg
gagcagcagcaggggttggtggggcgctttaaagtgagctga
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