Pseudomonas avellanae: BKM03_16890
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Entry
BKM03_16890 CDS
T05369
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00550
Peptidoglycan biosynthesis
pavl01100
Metabolic pathways
pavl01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BKM03_16890 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BKM03_16890 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pavl01011
]
BKM03_16890 (mrdA)
Enzymes [BR:
pavl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BKM03_16890 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pavl01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
BKM03_16890 (mrdA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
MAP
Motif
Other DBs
NCBI-ProteinID:
AVB20700
UniProt:
A0AAD0DZH7
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All DBs
Position
complement(3524087..3525976)
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AA seq
629 aa
AA seq
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MPNPIPLKDHEKETRLVNQRLIACAVLVGLLAACLVARMYFLQVTEFDYHSTISENNRVH
VLPIPPERGLIFDRNGEVLADNRPSFNLTLTRERAGDWHKVIDELMTLLELPDEDRILFD
KELKQVRHPFEPATLLYELTEQQIAILAVNQYLLPGVDVAAQFVRHYPLGDHFAHSIGYV
GRINEKEASHLDNEYRGTQSIGKTGIERFYESELHGHVGYEEVETNAQGRVLRVLKHTDP
IPGKNITLSLDAHLQAAAENALGDRRGSVVALDPETGEVLAMVSKPSFDPNLFVTGISFK
QYAALRDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVVNASTKVFDPGYFQLPDFD
HKYRNWNHSGDGWVDMDTAIMRSNDTYFYTVAHKLGIDRLHDYMTMFGIGQKVSLDMFEE
SAGLMPSREWKRATRRQAWFPGETVILGIGQGYMQVTPLQLAQATSLIASKGVWHRPHLA
MEVGHEVPVDEHPMPNIVLRDPNEWNQVNTGMQMVMHDPRGIARDAAKGAQYRIAGKSGT
AQVVAIKQGERYNRLKTLERNRDNALFVGFAPADHPKIVVSVTIENGEAGGRVAGPVVRE
ILDAWLLDSEGKLKPQYAVPAKATGNPHA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatccaatccccctgaaagaccacgaaaaagagacgcggctggtcaaccagcgt
ctgatcgcctgtgcggtactggtcgggctgctggctgcctgcctggtcgcacggatgtat
tttctgcaagtcaccgagttcgactaccactcgaccatctctgaaaacaaccgggtgcac
gtgctgccgatcccgcccgagcgcggtttgatcttcgaccgtaacggcgaagtactggcc
gacaaccgtcccagttttaacctgaccctgacccgcgagcgcgccggggactggcacaag
gtgatcgatgaactgatgacattgctggaactgcccgacgaggaccggattctgttcgac
aaggagctcaagcaagttcgccacccgttcgagcccgcgaccctgctgtatgaactgacc
gagcagcagatcgccatattggcggtcaatcaatacctgctgccgggcgtggacgtggcg
gcgcagttcgttcggcactatccgctgggcgatcattttgcccattcgattggctatgtc
gggcgcattaacgaaaaagaggcgtcgcacctcgacaacgaataccgcggcacgcaatcc
atcggcaagaccggcatcgagcgtttctacgagtccgaactgcacggccatgtaggttac
gaagaagttgaaaccaacgcgcaaggccgtgtgttgcgggtgctgaaacacactgatccg
atccccggcaagaacatcacgctgagcctggatgcgcacttgcaggctgcggcggaaaac
gccctgggtgaccggcgcggttcggtggttgcgctggacccggaaaccggcgaagtgctg
gcgatggtcagcaagccgagcttcgaccccaacctgttcgtcaccggcatcagcttcaaa
cagtacgccgcgctgcgcgattccatcgaccggccgctgttcaaccgggtgctgcgcggc
ctctatgcaccgggttcgacagtcaagcctgaagtcgcgattgccggcctggacagcggc
gtggtcaatgcatcgaccaaggttttcgacccgggctatttccagctgccggacttcgat
cacaagtaccgcaactggaaccacagcggtgatggctgggtggacatggacacggcgatc
atgcgctccaacgacacctacttctacaccgtggcgcacaagctcggcatcgaccgcctg
catgactacatgaccatgttcggcatcggccaaaaggtctcgctggacatgttcgaagaa
tccgccgggctgatgccgtcccgcgagtggaagcgcgccacgcgtcgccaggcgtggttc
ccaggcgaaaccgtgatcctcggtatcggtcagggctacatgcaggtcacgccgttgcaa
ctggcgcaggccacctcattgatcgccagcaaaggtgtctggcaccgtccgcacctggca
atggaagtgggccacgaggtgcctgtcgatgagcacccgatgccgaacatcgtgctgcgc
gaccccaatgaatggaatcaggtcaataccggcatgcagatggtcatgcacgacccgcgt
ggcatcgctcgtgacgccgccaagggcgcgcagtatcgcatcgccggcaagagcggtacg
gcgcaggtggttgcgatcaagcagggcgagcgttacaaccgcctgaagacgctggagcgt
aaccgcgacaacgccttgttcgtcggttttgccccggctgatcatccgaaaatcgtggtg
tcggtgaccatcgagaacggtgaggcgggtggccgcgttgcagggccagtggttcgggaa
attctcgacgcctggctactcgacagcgagggcaagctcaagccgcaatatgcagtcccc
gccaaggcaacgggcaacccgcacgcctga
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