Pseudomonas avellanae: BKM03_17940
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Entry
BKM03_17940 CDS
T05369
Name
(GenBank) L,D-transpeptidase
KO
K19236
L,D-transpeptidase
Organism
pavl
Pseudomonas avellanae
Pathway
pavl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
BKM03_17940
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pavl01002
]
BKM03_17940
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pavl01011
]
BKM03_17940
Peptidases and inhibitors [BR:
pavl01002
]
Cysteine peptidases
Family C82
BKM03_17940
Peptidoglycan biosynthesis and degradation proteins [BR:
pavl01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
BKM03_17940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
AVB20891
LinkDB
All DBs
Position
complement(3736330..3737295)
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AA seq
321 aa
AA seq
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MLSRIPAVTRCLSLAALCAASSVHALEFPLPPPGEDIVGQVQVIQAKYEDTFADLGTKYD
LGYLEMIAANPGVDPWLPGAGKDIVLPTRFILPPGPREGIVINLAEYRMYYYPKGQNVVH
TYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASIKAEHAADGDPLPNVVPAGPDNPLGP
FKFGLGLSGYLIHGSNKKFGIGMRTSHGCFRMYNNNVLELADMAPVGTTVRIISEPYKFG
LSGGKVYLEAHTPVDDLGNPSVVDKHTAVINALLKRDDLANNLRMNWDMVRDVVAAEDGM
PVEIAVPGVASARAEEPVIFQ
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgcgcattccagccgttacccgctgtctgtcgcttgctgctctgtgcgcggcg
agctctgtccatgctctggagtttccattgccgccgcccggcgaggacatcgttggccag
gtgcaggtcattcaggccaaatacgaagatactttcgctgatctgggcactaaatacgac
ctgggctatctggaaatgatcgccgccaacccgggcgtggacccgtggctgccgggtgct
ggcaaggacatcgtgctgccgacccgcttcattctgccgccgggtccgcgcgaaggaatt
gtcatcaacctcgccgaataccgcatgtattactaccccaaggggcagaatgtggtgcac
acatatccgctgggcgtcggtcgtgaaggctggggttcgcctatcggtgtgaccaaggtg
acggccaagaccccgaacccgacctggacaccgcccgcttcgatcaaggccgagcatgct
gccgacggtgatccgttgcccaacgtcgtgccggctggcccggataacccgctgggtccg
ttcaagttcggcctgggcctgtctggctacctgatccacggctcgaacaagaagttcggc
attggcatgcgcaccagccacggctgtttccgcatgtacaacaacaacgtactggaactg
gccgacatggcccctgtcggcaccacagtgcgcatcatcagcgagccctacaaattcggc
ctcagcggcggcaaggtctaccttgaagcgcacacaccggtcgacgacctgggcaacccc
tccgtggtcgacaaacacaccgcagtcatcaacgcgctgctcaaacgtgacgatctggcc
aacaacctgcgcatgaactgggacatggtccgtgacgtggtagcagccgaagacggcatg
ccggtggagattgcagtgcctggggtcgcttctgcgagagcggaagagccggtgattttt
cagtag
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integrated database retrieval system
