Pseudomonas avellanae: BKM03_18680
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Entry
BKM03_18680 CDS
T05369
Name
(GenBank) RNA polymerase factor sigma-70
Organism
pavl
Pseudomonas avellanae
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_3
HTH_24
Sigma70_ECF
HTH_38
HTH_23
HTH_Tnp_ISL3
Phage_terminase
HTH_10
GerE
Motif
Other DBs
NCBI-ProteinID:
AVB21020
UniProt:
A0AAD0GPK0
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Position
3953427..3953963
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AA seq
178 aa
AA seq
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MTEHVITSKCESPLLQAFVDNYLLLVKIAARIVGCRSRAEDVVQDAFFRLRSAPQATLTF
KAQLSYLFQIVRNLAIDHYRKQALEQKYTGPEAEGLNVVIQGASPEISHINFTSLEKIAD
ALSELPPRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALIHCRKVNGANAEA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacacgtaatcacaagtaagtgcgagtcaccgctactccaggcattcgtcgac
aactatctgctgctggtcaagattgccgcgcgcatcgtgggctgccggtctcgcgccgag
gacgttgtgcaggatgcgttcttcagattgcgctccgcgcctcaggccacgctgaccttc
aaggcacagctcagctatctgtttcagatcgtgcgcaatctggccatcgatcactaccgc
aagcaggcactggaacagaaatacaccggccccgaggccgaggggctgaatgtggtgatt
cagggtgcatcgccagagatctcgcacatcaacttcacaagcctggagaaaattgccgac
gccttgagcgagttgccgccccgcactcgttacgcgttcgagatgtaccgcctgcacggc
gtgccgcagaaggacatcgccaaggaactgggcgtatcgccgacgctggtcaatttcatg
atccgcgatgcgctgattcattgccgcaaggtcaacggcgccaacgccgaagcctga
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